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Species Covered

Species

Ascidiacea (commonly known as the ascidians or sea squirts), is a wide class in the subphylum called Tunicata (also known as Urochordata). Ascidians are present throughout all over the world's seas and oceans. These species are characterized by a tough outer "tunic" made of the polysaccharide cellulose.

Genome Annotations

Annotations

Explore ascidian gene models, cis-regulatory sequences, and other genomic features based on their functional annotations.

Anatomy

Anatomy

Explore the identity, morphology and relative position of anatomical territories of developing ascidian embryos and larvae.

Gene Expression & Function

Expression

Explore gene expression profiles, cis-regulatory sequence activity and the effect of perturbations in gene function.

Literature

Literature

Search the ascidian literature for authors, genes, biological processes

Blast

Blast

Find ascidian gene models showing nucleotide or protein sequences similarity to your gene of interest.

Genome Browser

GBrowse

Visualize gene models and other functional annotations in their genome context.

Morphonet Browser

Morphonet

Explore the structure, dynamics and variability of biological shapes, including embryos from 3D and 3D+t segmented datasets.

TIPS
How do I search for regulatory sequences?

In Aniseed, a regulatory region is a segment of the genome that has been tested for its capacity to drive expression in vivo...