- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Haaura.CG.MTP2014.S3...' >
- Transcript 'Phmamm.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S9.g00378.02.t
Possible name(s)
DLC1; STARD13; STARD8
Gene model
Location
S9 [104,395 / 114,895]
Amino acid sequence
Length: 1,290
>Phmamm.CG.MTP2014.S9.g00378.02.p
MLVDLNRKLGEMDVRSSVPYSQVNRRSCEGAIRKSAVAVVEKQLNHRSIHSDPGLCFKTR
PVISDQVLKQLADVVLRRTEPGNLLRSRAAFGLDDRRQVSNLAPGYGCYNAKAHDDYCYQ
GSENRRSRDNRRVCVLDSKLLEYRQCTKSRVKSTSLSSSATSIYSEDDTYRSSVSPSPIP
SCSSECPSVISGSRRSSFSLLEEEEDCETVAQSNNNNNGEHGIVKIEGNVLLVNLDDFEQ
SRHPHALIEGNVLLVNLDDFEQSRHPHALVTESLSIIQEDCSPVNDKQMKVKDAQTDDDD
VEDEEEECAISEYWKLEEDGRRWSRLDSKGAEVNRNPSNASSKLLPHLDESQEDAGDVFA
PEERLSSAGSDDPSPPDQQRPIIDGALKHSGIKVGKSKSNSFLRRVDLRKFRPGSFRRHQ
RTGSADVDPRTASKARPLGDVKSKSIRKGGKTIVISEPVLKSGHEKIDNMRCLPIEQSTA
NGISNLQNQHRGRKNSSQSLISSSSSSGSGAASTASTPASRLRSFTEDFSSKSDSGEIES
STGRRFTRPHLETSSSKSRAQTLPDPESTIFMMPKDHIPGKFPSAIRELGSDGEAAPLSG
GSESDSNSGRTQRPVSIYDNLPESALNGAASAQDLMNILDPTARSVDDSGVFVVGSQESL
DVGAPAPTDAAFWSVDDIVERTHTLQQMVRSWEDEEDNKSDHQEAVVLPSYSSENISSAE
DETIAASRGADSDHKLRLRQARLRWQSFNRDHGPGSQSQQTLQLHNLSVGQLMILRRLSM
LKLTALLESYAFNTSKGSLSWSVPRFIRRIKVPDYKDKAVFSVPLLQNVKRFGQPLPQCI
QHALAFLRRTALDQVGLFRKPGVRSRIQKLRANCENNPLLANFEECSAYDVADMVKQFFR
ELPDPLMTMKMSETFIGIFLYVPKELWLQTLQAAVMLLPDETRETLKTLLCFLSDVSSRS
AENHMNETNLATCFAPSLFYQQFGSIKSASSSSPKVRKQQAGKGATGLALGRPDMKEMNE
NVAANNCLAFMIRHVKELFKISEDAMTQCRMSVMQQSEDVLADEIGYTPDMGDESDYYAD
FHAYVDRITSQTIREEQRVSQNKGGWQSVPSAPGSELMYKKMNDDNPLRMWRCQVEIEGA
DVRQVTDRVLNERHLWDDDLVQWKVVQQPDERTQMFQSVRAEMSPHPTRDYCVLRSWRTN
ANSRGASVIVEASTSQPNLLGDVRGVVLTSRYVIEPTDNPSKCLLTHVSRVDTKGRNPEW
YNKTFGHIDCQLLLRLRDSIRVMPPKVAST
Nucleotide sequence
Length: 3,873
>Phmamm.CG.MTP2014.S9.g00378.02.t
ATGCTCGTGGATTTAAACAGAAAACTTGGTGAGATGGATGTACGGAGTTCAGTGCCGTAT
AGTCAGGTTAACCGCAGAAGTTGCGAAGGAGCTATCCGAAAATCGGCCGTAGCTGTCGTT
GAAAAGCAACTCAATCACAGAAGTATACACAGCGACCCTGGATTATGCTTTAAAACTCGG
CCTGTAATCAGTGACCAAGTACTCAAGCAGCTTGCCGACGTTGTGCTGCGTCGTACCGAG
CCCGGAAATTTGCTGCGTTCGCGCGCGGCGTTTGGACTCGATGATCGCCGGCAAGTTTCG
AACCTCGCACCGGGGTATGGATGCTACAATGCCAAAGCACATGATGACTATTGCTATCAA
GGAAGTGAAAATAGACGCAGCAGAGACAACCGACGTGTCTGTGTCCTCGATTCTAAGCTT
CTAGAATACCGACAATGCACAAAATCGCGCGTTAAGAGTACTTCTTTATCTTCATCGGCA
ACAAGTATTTATTCCGAGGATGATACCTACAGATCTTCAGTGAGTCCTTCTCCCATCCCC
TCCTGCTCTTCCGAGTGCCCCTCCGTGATCTCCGGATCCAGGAGAAGCTCCTTCAGTCTT
CTTGAGGAAGAAGAAGATTGTGAAACTGTAGCTCAGAGCAACAATAACAACAATGGAGAG
CATGGGATCGTAAAGATTGAGGGCAATGTTCTTTTGGTTAATCTCGATGATTTTGAGCAA
TCTCGACATCCACATGCATTGATTGAGGGCAATGTTCTATTGGTTAATCTCGATGATTTT
GAGCAATCTCGGCATCCACATGCATTGGTCACAGAGTCATTGTCCATCATACAAGAGGAT
TGTTCTCCTGTAAACGATAAACAAATGAAGGTGAAAGATGCGCAGACGGACGACGATGAT
GTTGAAGACGAGGAGGAAGAATGCGCGATCAGCGAGTACTGGAAGTTGGAGGAAGACGGG
AGAAGATGGTCGAGACTCGATAGCAAAGGAGCTGAAGTGAATAGAAATCCGTCGAACGCT
TCAAGCAAACTGCTGCCCCACCTCGACGAATCACAAGAGGACGCCGGTGACGTATTTGCC
CCCGAAGAGCGACTCTCCAGCGCTGGTAGTGACGACCCTTCACCTCCCGATCAGCAGCGT
CCAATCATCGACGGCGCTTTGAAACACAGCGGAATAAAAGTGGGAAAATCGAAAAGCAAC
AGCTTTCTGCGTCGGGTAGACCTCCGTAAATTTCGACCCGGTTCCTTTCGGCGACACCAG
CGAACCGGTTCCGCTGACGTGGACCCTAGAACCGCCAGCAAGGCACGTCCGTTGGGCGAT
GTGAAGTCCAAGTCGATAAGGAAAGGTGGAAAGACAATCGTCATCAGCGAACCTGTGCTG
AAAAGTGGTCATGAGAAGATTGACAACATGCGATGTCTTCCCATCGAACAATCAACCGCA
AACGGGATTAGCAACCTCCAGAACCAGCATCGCGGAAGAAAGAACTCCTCTCAATCTCTC
ATCAGCTCCTCATCCTCTTCTGGAAGTGGAGCAGCCAGCACCGCATCTACTCCTGCTTCT
CGTCTCCGCTCCTTCACAGAGGACTTCAGTTCAAAATCTGATTCTGGTGAAATTGAATCC
TCCACTGGTCGCCGCTTTACCCGTCCTCATCTCGAAACTTCCTCATCCAAATCAAGAGCA
CAAACTCTTCCCGATCCCGAATCCACAATCTTCATGATGCCAAAGGATCACATTCCCGGC
AAATTCCCTTCTGCCATCCGGGAACTCGGATCTGACGGAGAAGCTGCTCCTCTTTCAGGA
GGAAGCGAGTCCGACTCCAATTCCGGGAGAACCCAACGTCCCGTGAGCATTTACGACAAC
CTCCCAGAGAGCGCTCTGAATGGAGCAGCATCCGCTCAAGATCTTATGAACATTCTGGAT
CCGACTGCCAGATCGGTGGATGACTCTGGAGTCTTTGTGGTCGGGAGCCAAGAATCTTTG
GATGTTGGTGCTCCTGCTCCGACGGATGCTGCTTTCTGGAGCGTGGATGACATCGTTGAG
AGGACGCACACTCTCCAGCAGATGGTGAGGTCGTGGGAAGATGAGGAAGATAATAAATCT
GATCATCAGGAAGCGGTTGTCTTGCCAAGCTACAGCTCAGAGAACATATCATCAGCCGAA
GATGAAACAATAGCGGCTTCAAGAGGCGCCGACAGCGATCACAAACTTAGACTCCGACAA
GCCAGGCTCAGATGGCAGAGTTTCAACCGCGATCACGGACCCGGTTCTCAATCACAACAA
ACTTTACAACTCCACAACCTTTCCGTCGGTCAACTGATGATTTTGAGGCGCTTGTCGATG
TTAAAACTTACGGCTTTGCTGGAAAGTTACGCCTTCAACACAAGCAAAGGCTCTTTGAGC
TGGTCCGTACCTCGCTTCATCCGTCGCATCAAGGTTCCGGACTACAAAGACAAGGCAGTC
TTCAGTGTCCCCCTCCTACAGAACGTGAAACGATTTGGACAGCCACTTCCCCAATGCATA
CAACACGCCTTGGCTTTTCTCCGCCGTACGGCGCTAGACCAAGTCGGCCTGTTCCGCAAA
CCTGGCGTTCGATCCAGGATCCAGAAGCTCCGTGCAAACTGCGAAAACAACCCTCTCCTG
GCCAACTTTGAGGAGTGTAGCGCTTATGATGTAGCAGATATGGTGAAACAGTTCTTCCGC
GAGCTCCCAGACCCACTGATGACCATGAAAATGTCAGAAACGTTTATTGGAATCTTCCTA
TATGTCCCAAAAGAACTCTGGCTTCAAACGCTGCAGGCGGCCGTTATGCTTTTGCCAGAC
GAAACTCGGGAAACGTTAAAGACTTTGCTCTGCTTCCTCAGTGACGTTTCATCACGTTCT
GCTGAAAATCACATGAACGAAACGAATCTCGCAACATGCTTTGCACCTTCGCTTTTCTAT
CAACAATTCGGCAGCATTAAAAGTGCCTCGTCATCCTCGCCAAAAGTGCGAAAACAGCAG
GCTGGCAAGGGTGCGACCGGTTTGGCGCTTGGACGGCCGGACATGAAAGAAATGAACGAA
AATGTGGCAGCGAACAACTGTCTGGCCTTCATGATTCGTCACGTCAAGGAATTGTTCAAG
ATCTCCGAAGATGCTATGACGCAATGTCGTATGTCTGTGATGCAACAAAGCGAAGACGTT
TTAGCCGACGAGATCGGTTACACCCCCGACATGGGCGACGAGAGCGATTATTACGCCGAT
TTCCATGCCTACGTCGACCGTATTACGTCACAGACGATTCGTGAAGAACAGCGCGTGTCG
CAGAACAAAGGCGGATGGCAAAGTGTGCCGAGTGCCCCGGGAAGCGAACTTATGTATAAG
AAGATGAACGACGACAATCCTCTGCGAATGTGGCGTTGCCAGGTTGAAATTGAAGGAGCC
GATGTAAGGCAGGTTACCGACCGAGTGCTAAATGAACGGCACCTGTGGGATGATGACCTT
GTGCAATGGAAAGTTGTGCAGCAACCTGACGAAAGAACTCAGATGTTTCAAAGCGTGCGA
GCTGAAATGAGCCCACACCCGACCAGGGATTACTGCGTTTTAAGATCATGGAGAACAAAC
GCCAACTCGCGCGGCGCTTCCGTCATTGTCGAAGCTTCCACGAGCCAACCCAACCTCCTC
GGTGACGTCAGAGGCGTCGTACTGACGTCACGCTACGTCATCGAGCCTACAGACAACCCG
TCCAAGTGTTTGCTTACCCACGTGAGTCGCGTGGACACCAAAGGCCGAAACCCGGAATGG
TACAACAAGACTTTCGGCCACATCGACTGTCAGCTGCTGCTCAGGCTCAGGGATTCAATT
CGTGTCATGCCGCCCAAGGTCGCTTCCACGTAA
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[808-1038] 3.3E-66 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[817-1039] 2.16E-44 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[823-1039] 35.899 |
| SMART |
RhoGAP_dom (IPR000198) - T[834-1036] 2.1E-50 |
| Pfam |
RhoGAP_dom (IPR000198) - T[837-983] 3.0E-36 |
| SMART |
START_lipid-bd_dom (IPR002913) - T[1088-1289] 5.2E-14 |
| Pfam |
START_lipid-bd_dom (IPR002913) - T[1097-1267] 4.5E-22 |
| Gene3D |
START-like_dom_sf (IPR023393) - T[1105-1284] 7.4E-43 |
| ProSiteProfiles |
START_lipid-bd_dom (IPR002913) - T[1105-1261] 19.972 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RHG07_HUMAN | 34.715 % | 503 | 3.92E-154 |
| STA13_HUMAN | 35.423 % | 501 | 3.65E-157 |
| STAR8_HUMAN | 39.154 % | 378 | 1.03E-112 |