- Transcript 'Phmamm.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S94.g03019.01.t
Possible name(s)
SLC6A1; SLC6A2; SLC6A9
Gene model
Location
S94 [2,429 / 6,995]
Amino acid sequence
Length: 457
>Phmamm.CG.MTP2014.S94.g03019.01.p
MSEKTCKVIYDEKEIDSSKSSSEEDNSTRETWGKQWEFIFAMVGYSVGLGNVWRFPYLCY
RNGGGAFLLVYFLIMLVGGIPMFFLEVAIGQYTRLGAVEVWKILPSMKGIGYGCTFVNLV
FSTYNMVVMAWSVYYFFNCLFPGELPWTLCGQWWNSPDCRLPGFQENQTTGGNDTYIMVN
SSDANMSALAVSPESEFWRRNVLQQSSGLSEIGTITNWPLVACFLGSWLVIYLCIFKGTR
WSGKVVYFTSTLPYVLLAVLLVRGLTLEGASTGIEYLLKPNFTKLKEAQDKDVSQVAVGG
PGLVFLVYPVGLSLLPMPKLWSGLFFATLFLVGVDTQFACVECGVSTIADVVPRMKRGKY
GQEKLTAIVAGTLLLLGLPLLTNGGIYLFELLNMYAASGISLLWLVFFEAIAIGWIYGAD
RFYGNIESMIGYFPIGYFKYCYKFITPGMATVRIYKM
Nucleotide sequence
Length: 1,374
>Phmamm.CG.MTP2014.S94.g03019.01.t
ATGAGTGAAAAAACGTGCAAAGTCATCTACGATGAGAAGGAGATAGACAGCTCCAAGTCT
AGCAGCGAAGAGGATAACAGCACGAGGGAAACGTGGGGAAAACAGTGGGAGTTCATATTT
GCAATGGTCGGCTATTCAGTTGGCCTCGGGAACGTTTGGCGCTTCCCCTACTTGTGTTAC
CGAAACGGCGGAGGTGCCTTCCTGCTGGTGTACTTCCTTATCATGCTGGTTGGTGGCATC
CCAATGTTTTTCCTCGAAGTTGCGATCGGTCAGTACACAAGACTGGGCGCGGTTGAAGTC
TGGAAGATTCTTCCTTCCATGAAGGGTATCGGATACGGATGCACTTTCGTCAATCTCGTG
TTCAGCACCTACAACATGGTGGTCATGGCTTGGTCAGTTTACTATTTCTTTAACTGCTTG
TTTCCCGGAGAACTGCCCTGGACGCTTTGTGGGCAATGGTGGAACAGTCCAGATTGTCGA
CTACCAGGATTCCAAGAAAACCAAACCACAGGGGGCAATGACACCTATATTATGGTCAAC
AGCAGCGACGCCAACATGTCGGCGTTGGCAGTTTCGCCCGAATCAGAATTTTGGAGGCGA
AATGTGCTACAGCAGTCATCAGGTCTCTCCGAAATAGGAACAATTACAAATTGGCCTTTG
GTGGCTTGTTTTCTTGGTTCGTGGCTCGTGATTTACCTTTGCATATTCAAAGGCACTCGC
TGGAGCGGAAAGGTCGTGTACTTCACTTCAACACTCCCGTACGTCCTCCTTGCAGTGCTT
CTTGTAAGGGGCTTGACACTCGAGGGCGCTTCAACGGGAATCGAGTATCTGCTAAAGCCG
AATTTTACCAAGTTGAAGGAGGCCCAAGATAAGGATGTGAGCCAAGTAGCTGTTGGAGGT
CCCGGTCTTGTGTTTCTTGTGTACCCTGTTGGTTTGTCGCTTTTGCCGATGCCGAAGCTC
TGGTCTGGCCTCTTTTTCGCTACACTTTTTCTGGTGGGAGTCGACACACAGTTTGCTTGT
GTGGAGTGTGGGGTGTCGACCATCGCGGATGTTGTTCCGCGGATGAAACGCGGCAAGTAC
GGACAGGAGAAGCTTACTGCAATCGTTGCCGGAACCCTTTTGCTTCTTGGGCTGCCTCTA
CTCACAAATGGTGGTATCTACCTTTTCGAGCTGCTAAATATGTACGCCGCTAGCGGTATA
TCTCTTCTCTGGTTGGTGTTCTTTGAAGCAATTGCTATTGGCTGGATTTACGGGGCCGAC
CGTTTCTATGGCAACATCGAGTCTATGATTGGCTATTTCCCGATTGGTTATTTCAAATAC
TGCTATAAGTTCATCACCCCTGGAATGGCGACGGTACGTATATACAAGATGTGA
| PANTHER |
Na/ntran_symport (IPR000175) - T[17-289] 1.2E-150 - T[288-452] 1.2E-150 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[28-457] 59.414 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[29-453] 6.8E-116 |
| Pfam |
Na/ntran_symport (IPR000175) - T[29-289] 5.0E-93 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[37-58] 5.6E-38 - T[66-85] 5.6E-38 - T[109-135] 5.6E-38 - T[399-419] 5.6E-38 - T[439-457] 5.6E-38 |
| ProSitePatterns |
Na/ntran_symport (IPR000175) - T[53-67] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC6A9_HUMAN | 45.421 % | 243 | 4.83E-73 |
| SC6A2_HUMAN | 43.299 % | 244 | 2.52E-74 |
| SC6A1_HUMAN | 40.893 % | 232 | 9.26E-70 |
