- Transcript 'Phmamm.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S90.g02961.01.t
Possible name(s)
DDX27; DDX47; DDX49
Gene model
Location
S90 [247,668 / 253,383]
Amino acid sequence
Length: 592
>Phmamm.CG.MTP2014.S90.g02961.01.p
MTDLILTIENEEDLTIEPEGSDSDEEITIVSKKQRTQKKLEKKGFNPDFQFEDDGFYETK
WTLESALHNALKQKPISHEKPEDVDDLSDQIEDENEVENVGKIKTDKINLINRKRKRNAN
AEEDDSNLPVPLAEIQDSSGGDKNMSWDPTLGFQEMNLSRPLLKSISEINYVTPTPIQQA
AIPVGLLGRDISACAATGTGKTAAFMLPVLERLLYRPQSSAFTRVLCLVPTRELAVQVYS
VTQQLAQHSSIRICLAAGGLDIKTQEAALRQGPDIVIATPGRLIDHLHNTPSFDLHLVEI
LILDEADRMLDEFFEDQMNEIIKLCSHQRQTMLFSATMSEQVQELAAVSLKNPVKIFVNS
NTDVAPYLKQEFIRIRPNREGDREAIVAALCSRSFISNVLVFTQTKKQAHRMHIVLGLLG
LKAGELHGDLSQTQRLEGLRRFKNEDVDILVCTDLAARGLDIENVKTVINLTMPNTHQHY
VHRVGRTARAGKSGRSVSLVGESERKLLKEIVKFAKNQVKSRVVPAEVVNKFADKLKLLE
NEVGEVMQMEAQEKTLLAQENQLKKAEKIVKGEAPEKRNWFQSKIEREMSRG
Nucleotide sequence
Length: 1,779
>Phmamm.CG.MTP2014.S90.g02961.01.t
ATGACTGATTTAATACTCACCATAGAAAACGAAGAGGATTTAACCATAGAACCTGAGGGC
AGTGACTCAGATGAAGAGATTACCATTGTCAGCAAAAAGCAAAGGACACAAAAAAAGTTA
GAAAAAAAAGGATTTAATCCTGACTTTCAATTTGAAGATGATGGTTTTTATGAAACAAAG
TGGACCTTAGAATCAGCACTGCACAATGCTTTAAAGCAGAAGCCTATTTCCCATGAAAAG
CCTGAAGATGTTGATGACTTATCTGATCAAATAGAGGATGAAAATGAGGTTGAAAATGTT
GGCAAAATAAAAACTGACAAAATAAACCTCATCAATCGGAAAAGAAAAAGAAATGCTAAT
GCAGAAGAAGATGACTCTAATTTACCTGTTCCACTTGCTGAAATACAAGATAGCAGTGGT
GGTGATAAAAACATGTCATGGGACCCGACTTTGGGTTTTCAGGAAATGAACCTTTCCAGA
CCCTTGTTAAAATCCATCAGTGAAATAAACTATGTCACACCAACCCCTATTCAGCAAGCA
GCAATACCTGTTGGTTTGCTTGGCAGAGATATATCAGCTTGTGCAGCAACTGGGACAGGT
AAAACAGCTGCTTTTATGTTACCTGTCCTGGAACGACTTCTCTACCGTCCACAATCATCA
GCCTTTACAAGAGTCCTGTGTCTTGTTCCTACCAGAGAACTTGCAGTTCAAGTGTATTCT
GTAACCCAACAACTTGCACAGCATAGCTCAATTAGAATATGTCTTGCTGCGGGTGGTCTT
GATATCAAAACACAGGAAGCAGCACTACGACAGGGGCCAGATATTGTCATTGCCACACCG
GGTCGTTTAATTGATCATTTGCACAACACACCTTCATTTGACCTCCATCTTGTTGAAATC
CTCATTCTTGATGAGGCTGATAGAATGCTTGATGAGTTTTTTGAAGACCAGATGAATGAA
ATCATCAAACTATGTTCCCACCAAAGACAGACAATGTTATTTTCTGCCACAATGTCAGAA
CAGGTACAAGAACTTGCTGCAGTTTCGTTAAAAAATCCGGTAAAAATATTTGTGAACAGC
AACACTGATGTGGCACCGTACCTGAAACAAGAGTTCATACGAATTCGACCAAACAGAGAA
GGAGATCGAGAGGCTATTGTTGCAGCTCTTTGCAGCAGATCTTTCATAAGCAATGTGTTG
GTGTTCACTCAAACAAAAAAGCAAGCACACAGAATGCATATTGTTCTTGGATTACTTGGT
TTAAAGGCTGGAGAACTTCATGGGGATTTATCCCAAACTCAACGTCTTGAAGGTTTACGG
CGATTTAAGAACGAAGACGTTGACATTCTTGTGTGTACAGATCTTGCGGCGCGTGGACTG
GATATCGAAAACGTTAAAACAGTTATCAATTTAACGATGCCAAACACGCATCAGCATTAC
GTACATCGCGTTGGGCGTACTGCTAGAGCTGGAAAAAGTGGGCGATCTGTTTCGTTGGTG
GGCGAAAGCGAGCGTAAACTCCTAAAGGAAATTGTGAAGTTTGCAAAAAATCAAGTTAAG
AGTCGTGTCGTTCCTGCAGAGGTTGTCAACAAATTTGCCGACAAACTGAAGCTGCTTGAG
AACGAAGTGGGCGAAGTGATGCAAATGGAAGCACAGGAGAAAACGCTTCTTGCACAGGAA
AATCAATTAAAAAAAGCCGAGAAAATCGTGAAAGGGGAAGCCCCTGAAAAAAGAAACTGG
TTTCAAAGCAAAATAGAACGAGAAATGTCGCGAGGTTAA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[144-358] 2.8E-66 - T[298-505] 3.38E-47 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[151-179] 11.305 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[170-371] 4.9E-58 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[175-345] 1.5E-46 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[182-356] 30.918 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[302-310] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[367-530] 20.527 |
| CDD |
Helicase_C (IPR001650) - T[372-499] 1.29371E-31 |
| Pfam |
Helicase_C (IPR001650) - T[385-491] 1.2E-26 |
| SMART |
Helicase_C (IPR001650) - T[410-491] 2.5E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 56 % | 672 | 0 |
| DDX47_HUMAN | 41.274 % | 275 | 3.28E-86 |
| DDX49_HUMAN | 35.405 % | 229 | 3.09E-68 |