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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S896.g12656.01.t

Possible name(s)

GBE1

Location

S896 [3,147 / 9,469]

Sequences

Amino acid sequence

Length: 469

>Phmamm.CG.MTP2014.S896.g12656.01.p
MDFSTCDNLQQCDVPCIESLFANDPQLRSYEKDIRLRYGLFEKTLMAIEREEGFDRFSRS
YENYGVVLTHDGGVKCREWIPNARAVYLKGDFRNWERVNYKEVGYGQWEIYIPPNHDGSC
PIPHLSELKLLNERRDEDWNMNDICEMFLECRRGEKYITYPENYEQNTDDQWTIARQLMG
DECMLDGQEMSLKLDRGISLYKMIRLFTSAFSGQAFLNFMGNEFGHPDWVEFPSMQNFDN
YHLARRQFQLADNPQLRYKFLNNFDMEMNRLEERYNIVLDSDDKMFGGHGRNQASTDFCT
QQQACDNMKCSLMVYLPSRCVVVMANETIDSKQNWINANRVYNEYGNCGERGRNVNDVRR
GSEWHRHRSYSRGRQGFRQTSPGFETRFSGMCVTEPSYRREASPYKGRSINRSQNRSDCR
DGPDYNSRMYRGENIGKQMKSDVGRSSRSPVRSRSIGFKKSVSPTRYQN

Nucleotide sequence

Length: 1,410

>Phmamm.CG.MTP2014.S896.g12656.01.t
ATGGATTTCTCTACATGTGACAACCTTCAACAATGCGATGTTCCTTGCATTGAAAGTTTG
TTTGCTAACGATCCCCAACTGCGAAGTTACGAAAAGGATATTCGACTGAGGTATGGTTTG
TTCGAAAAAACTTTGATGGCAATTGAACGCGAGGAAGGGTTTGATCGATTCAGTCGCAGT
TACGAAAATTACGGTGTTGTACTTACCCATGATGGAGGGGTGAAGTGCAGGGAATGGATT
CCAAATGCACGGGCTGTCTACCTCAAGGGGGATTTTCGCAATTGGGAGAGAGTGAATTAC
AAAGAAGTTGGATACGGACAATGGGAGATTTACATTCCACCAAATCACGATGGAAGTTGT
CCAATCCCACATCTTTCCGAGCTTAAATTGCTAAACGAGCGGAGAGACGAAGATTGGAAT
ATGAACGATATTTGTGAAATGTTTTTGGAATGTCGAAGAGGTGAAAAATACATCACTTAT
CCCGAAAATTATGAGCAGAACACTGATGACCAGTGGACGATAGCAAGACAACTGATGGGT
GACGAATGTATGTTGGATGGACAAGAAATGTCTCTGAAGTTGGATAGAGGAATAAGTCTT
TATAAAATGATCAGATTGTTCACCAGTGCTTTCAGTGGACAAGCTTTTCTAAACTTTATG
GGTAATGAATTCGGTCATCCTGATTGGGTGGAGTTTCCATCAATGCAAAATTTTGACAAC
TATCATTTGGCGAGACGACAATTTCAGCTGGCCGACAACCCACAACTGAGATACAAATTT
CTCAATAACTTCGATATGGAAATGAATCGGTTGGAAGAACGGTACAACATCGTGCTGGAC
AGTGACGACAAAATGTTTGGAGGTCATGGAAGGAATCAAGCTTCAACTGATTTTTGTACC
CAACAACAAGCTTGTGACAACATGAAATGCTCTCTGATGGTTTACTTACCATCGCGATGC
GTTGTCGTCATGGCAAACGAAACTATTGATTCCAAACAAAACTGGATAAACGCCAACCGC
GTTTATAACGAGTATGGGAATTGTGGCGAGCGTGGTCGAAACGTCAATGATGTCAGACGT
GGATCGGAATGGCATCGACACCGAAGTTACAGTCGAGGTCGTCAAGGTTTTCGACAAACT
TCTCCTGGATTTGAAACACGTTTTAGTGGAATGTGTGTCACTGAACCGAGTTACCGAAGA
GAAGCAAGTCCTTATAAAGGCAGAAGTATCAACCGAAGTCAAAACCGTAGTGATTGCCGT
GATGGTCCGGATTACAACAGTCGTATGTATCGTGGTGAAAATATAGGCAAGCAGATGAAA
AGTGATGTTGGACGCAGCAGCCGAAGTCCTGTTCGAAGCAGATCTATTGGCTTTAAAAAA
TCAGTCAGTCCGACCCGATATCAGAATTAG

InterProScan

PANTHER
Branching_enzy (IPR037439) - T[16-130] 6.7E-82 - T[128-276] 6.7E-82 - T[273-328] 6.7E-82
Gene3D
Ig-like_fold (IPR013783) - T[29-120] 9.3E-10
SUPERFAMILY
Ig_E-set (IPR014756) - T[56-118] 3.5E-9
Pfam
Glyco_hydro_13_N (IPR004193) - T[64-116] 2.7E-7
SUPERFAMILY
Glycoside_hydrolase_SF (IPR017853) - T[131-270] 1.5E-7
Pfam
A-amylase/branching_C (IPR006048) - T[269-325] 5.5E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GLGB_HUMAN 38.583 % 168 1.42E-45