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- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S88.g02894.01.t
Possible name(s)
FSD1; MID1; MID2
Gene model
Location
S88 [43,511 / 47,210]
Amino acid sequence
Length: 287
>Phmamm.CG.MTP2014.S88.g02894.01.p
MAPAVPRICEELCTQSHDKVTVQWRSSDSRHTESYELQYAIDDRWTTPETPTEGWMIVPN
IKECNYTIHGMQTGTRYIFAVKAVNKAGSTRSEIVTIKTLGMPFAFDTHSMHKKLRLANH
GYTVSREDSNKKSKDSGSSSSMSGVSGNVVIEGGRHYWEVVVCQSSAFTLGVAYTNVPRF
EWIGKNNMSWCLCRSNQEWSVRHDNKEIPVHLPTPFPKKIGVLLDYDSGFLSFFDGASGR
RLHTFKVDFKRAIRPTFSVGNKSLTINTGITIPDQLQLSNDSNNYSA
Nucleotide sequence
Length: 864
>Phmamm.CG.MTP2014.S88.g02894.01.t
ATGGCACCTGCAGTGCCACGGATTTGCGAAGAGCTCTGCACACAGTCACATGACAAAGTC
ACTGTCCAATGGCGATCGAGCGATTCCCGCCACACAGAGTCATACGAGCTTCAGTACGCT
ATTGACGATAGATGGACCACTCCTGAAACGCCCACTGAAGGCTGGATGATCGTGCCCAAC
ATCAAGGAATGCAACTACACCATTCACGGAATGCAGACTGGCACACGATATATCTTCGCT
GTGAAGGCTGTCAACAAAGCTGGCTCGACGAGAAGCGAAATCGTGACCATCAAGACCCTT
GGCATGCCTTTTGCGTTTGACACTCACTCGATGCACAAAAAACTGCGTCTGGCAAACCAC
GGCTACACGGTTTCACGAGAAGACAGCAATAAAAAATCGAAAGACTCCGGATCCAGCTCC
TCTATGAGCGGTGTGAGCGGAAATGTTGTGATTGAAGGAGGAAGACATTACTGGGAGGTT
GTGGTCTGTCAGAGCTCGGCTTTTACTTTGGGAGTGGCTTACACGAATGTGCCTCGCTTT
GAATGGATAGGCAAGAACAACATGTCCTGGTGTTTGTGCAGGTCGAACCAGGAGTGGAGC
GTACGCCACGACAACAAGGAGATTCCTGTACATTTGCCCACTCCGTTCCCGAAGAAAATA
GGAGTTCTGCTGGACTACGATTCAGGCTTTCTATCTTTCTTTGACGGTGCCAGTGGGAGA
CGGCTTCACACATTTAAGGTCGACTTTAAACGAGCCATTAGACCCACGTTTTCAGTCGGA
AACAAGTCTTTGACGATCAACACTGGAATAACTATACCGGATCAACTTCAACTTTCAAAT
GACAGCAACAATTATAGCGCATAG
| ProSiteProfiles |
FN3_dom (IPR003961) - T[2-102] 13.089 |
| Gene3D |
Ig-like_fold (IPR013783) - T[2-98] 4.9E-22 |
| SMART |
FN3_dom (IPR003961) - T[3-90] 3.1E-5 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[13-102] 1.21E-13 |
| Pfam |
FN3_dom (IPR003961) - T[15-88] 3.6E-8 |
| CDD |
FN3_dom (IPR003961) - T[16-99] 1.88519E-9 |
| ProSiteProfiles |
B30.2/SPRY (IPR001870) - T[84-273] 21.173 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[102-274] 1.46E-38 |
| PRINTS |
Butyrophylin_SPRY (IPR003879) - T[138-162] 6.5E-8 - T[211-235] 6.5E-8 - T[241-259] 6.5E-8 |
| SMART |
SPRY_dom (IPR003877) - T[153-272] 4.8E-21 |
| Pfam |
SPRY_dom (IPR003877) - T[155-269] 7.0E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRI18_HUMAN | 48.043 % | 275 | 4.15E-88 |
| TRIM1_HUMAN | 43.366 % | 249 | 1.79E-77 |
| FSD1_HUMAN | 31.23 % | 131 | 7.24E-35 |