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  1. Transcript 'Boleac.CG.SB_v3.S103...'
  2. Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S883.g12580.01.t

Possible name(s)

Phmamm.CG.MTP2014.S883.g12580

Location

S883 [46,251 / 49,899]

Sequences

Amino acid sequence

Length: 1,215

>Phmamm.CG.MTP2014.S883.g12580.01.p
MRNQLIEKFNQINYPFKLETKSNKEEEIKFQTVLEEYQNVVTEQFTQLMRNIFDRCSKVI
GKPPCSFAVLGLGSLAKNEVTPFSDLESIIVLQNNAVVDDTVMNYFRNYAMMAQLVVIGL
GETILPAMSVKSLNDFETEGGDWFVDVVTRRGLSFDSHLPHACKNPLGRLPTKEKPWHTE
LIQTVDNMLKFVDEEIELKEGYHLADIISHSVFVSGGSKEGQPSGEEVAATFYNCIQSKI
DKKMKSQTSKRKLIATIQEDISTYGFHKLKHGQSVHVKKDLYRGITILMPQLAMLLGIKG
GSSYIIIQRLFECKIIDNEFCLDLKIAVAIANYARAKTYFDKGAQWDVLSGGKSHSKQVT
DVLETLSMSGLQLLIRVGTQFQESLAISFDIECGVKPLKVKHKKYFPLGKIFFRFEQYDQ
AIEWFEKQLEHLLVSYEDNSYMKISYAYLMLGRCHYSKNQHEAASAYFYKAEKYCHGENN
LQRGRILLFQALSERKLKGIDTTQSLMKRAHNCFCKSKLSETDEYTMESFVVILQSLCEA
NFDLVPELIEIMVITGDRLLNESNAPFLAISHYKNALYEMENYYKDERHILHILYVKEAI
AVCEGKLGNYDSAIDLWLEFAEGTKNTPKQHIFEISFQPGYDPIESLIQRRSYIRQAFVD
NQHRINAIDICCQLVKIVDKWLNSDSSKKLLRFSAMMNDLLSNLYERNKAYDLAIQHFRI
AKEVFLGLYPTSNYGEDKEVRLRLLNTTTGRVATKDICMSALKVFVKLDPMQTEFYLYMD
VLNRCWETYESRLTSGFCLSHDNDLLSGILTVVDLGLISVKDCNDCRLMLNFVLTLERHS
NTTSIDNTLVKFFIKLFPSFCLSTPESFKHLVEETVAIYRSPNREEKNIRNFLIRSSAAM
INKFPRFAFNVQTSTEIRTILNDDNIFKTKIEEFYLRVAVFNHFQKVNDLPEALKMLEPF
PVNTKTTILMRISAAKYLAANDKYTEATIAYNLVVTMVAENLDMSNIEKQLILVRVTLHN
ALTLILQNHPQLAILWCEDALNHIESYMEYTVEDVTVDEFKTQLVKIAVKLKQSEAHDEL
TKYRALLLNGNVNLILKPTNIEELHLLIELTNTPHVAINRIDRLPEILLKAASSPVLVSC
NDTNSKKKVVDLLLERILEIATELPSGSDLRPLAYALRAICKQRLVCSVELLQEVNSMVS
GSRFQLFLGPFCVPT

Nucleotide sequence

Length: 3,648

>Phmamm.CG.MTP2014.S883.g12580.01.t
ATGAGAAATCAATTGATAGAAAAATTTAACCAAATAAATTACCCTTTCAAACTTGAAACT
AAAAGCAATAAGGAAGAAGAGATTAAGTTTCAAACTGTACTAGAAGAATACCAAAATGTT
GTAACTGAACAATTTACTCAACTTATGAGAAATATTTTTGATCGTTGTTCCAAAGTAATA
GGCAAACCCCCATGTTCTTTTGCAGTGCTGGGTTTAGGGTCTCTAGCCAAAAACGAAGTA
ACACCTTTCTCTGACCTTGAAAGTATTATTGTGTTGCAAAACAATGCTGTAGTTGACGAT
ACTGTGATGAACTATTTTCGAAACTACGCAATGATGGCTCAACTTGTGGTCATCGGACTG
GGAGAGACAATTCTACCAGCAATGAGTGTAAAGTCTCTGAACGATTTTGAGACAGAGGGT
GGTGACTGGTTTGTTGATGTTGTAACGAGACGCGGACTTTCTTTTGATAGTCATCTACCT
CATGCTTGTAAAAATCCGTTGGGAAGATTGCCGACCAAAGAAAAACCTTGGCACACAGAA
TTGATACAAACTGTGGACAATATGTTAAAGTTTGTTGATGAGGAAATAGAGCTGAAGGAA
GGTTATCACCTTGCAGATATTATTTCACATTCAGTATTTGTTTCTGGAGGCAGCAAGGAA
GGTCAACCATCTGGTGAAGAAGTGGCCGCAACTTTCTATAATTGCATACAATCGAAAATT
GACAAAAAGATGAAAAGTCAGACAAGCAAGAGAAAACTTATTGCAACTATTCAGGAAGAC
ATTTCAACGTACGGTTTTCATAAGTTGAAACATGGACAATCAGTTCACGTAAAGAAAGAT
CTTTACAGAGGAATTACAATATTAATGCCACAATTAGCAATGTTGCTGGGTATCAAGGGA
GGATCGTCATACATAATTATTCAGCGTTTATTTGAATGTAAAATTATAGATAACGAATTT
TGTCTCGATCTTAAAATTGCTGTGGCCATTGCCAACTATGCTCGTGCGAAAACCTACTTT
GATAAAGGGGCACAATGGGATGTTCTATCTGGTGGAAAATCCCATTCTAAACAAGTAACA
GACGTTTTGGAAACTCTTTCCATGTCAGGTTTGCAACTTTTGATTCGTGTAGGAACTCAG
TTTCAAGAATCGTTGGCAATATCGTTTGACATCGAATGTGGAGTCAAACCATTAAAAGTA
AAACATAAAAAGTATTTCCCACTCGGAAAGATATTCTTTCGTTTTGAGCAATATGATCAG
GCAATTGAATGGTTTGAGAAACAATTGGAACATCTTTTAGTGAGCTACGAAGATAACTCT
TATATGAAAATCTCATACGCTTACCTAATGTTGGGCAGATGTCATTACAGCAAAAATCAA
CATGAAGCTGCTTCTGCATACTTCTATAAAGCTGAAAAATATTGTCATGGAGAAAACAAT
TTGCAACGTGGTCGTATCCTGCTTTTCCAGGCACTTAGCGAACGAAAATTAAAAGGCATA
GACACAACTCAAAGTTTGATGAAAAGGGCTCATAATTGCTTTTGCAAGTCAAAATTATCC
GAGACGGATGAATACACAATGGAGTCATTTGTCGTGATTCTGCAAAGTTTGTGTGAAGCA
AATTTTGATTTAGTACCAGAACTAATTGAAATTATGGTGATTACAGGTGACCGCTTATTG
AATGAAAGCAATGCACCATTTCTGGCAATCTCGCACTACAAGAATGCATTGTACGAGATG
GAGAATTACTATAAGGATGAAAGACACATATTACACATTTTGTATGTAAAGGAAGCGATA
GCAGTTTGCGAAGGAAAGTTGGGTAATTATGATTCAGCGATTGATCTCTGGTTGGAATTT
GCAGAAGGGACCAAAAACACGCCAAAGCAGCATATTTTCGAAATCTCATTTCAGCCAGGG
TACGACCCAATCGAATCTCTGATACAACGTCGGTCTTACATAAGACAAGCTTTTGTGGAC
AATCAACACCGCATCAATGCGATTGATATCTGTTGCCAACTTGTAAAGATTGTCGATAAA
TGGTTGAATAGTGACTCATCTAAGAAACTTCTACGATTCAGTGCAATGATGAACGACCTT
CTTAGCAATCTTTACGAAAGAAACAAAGCTTACGATCTTGCCATTCAACACTTTAGAATT
GCGAAAGAGGTTTTTCTTGGTTTGTACCCAACGTCAAATTATGGCGAGGACAAAGAAGTT
CGTCTTCGTCTACTTAACACAACAACTGGTCGAGTGGCGACAAAAGATATTTGCATGTCA
GCATTAAAAGTGTTTGTCAAACTAGATCCAATGCAAACAGAATTTTATTTGTATATGGAC
GTTCTAAACAGATGTTGGGAAACATATGAGAGTCGGCTGACATCGGGATTTTGTTTGTCT
CACGATAATGATTTGTTATCTGGAATTCTTACTGTTGTTGATTTGGGTTTAATTTCAGTT
AAGGACTGTAATGACTGCAGATTGATGTTAAATTTTGTTCTGACTCTGGAACGCCATTCA
AACACTACGTCTATAGACAATACACTGGTCAAATTTTTCATAAAATTGTTTCCAAGTTTT
TGTTTGAGTACCCCAGAAAGCTTTAAGCATTTAGTTGAAGAAACCGTGGCGATTTATCGC
AGTCCAAACAGGGAGGAAAAAAATATCCGTAATTTCCTGATACGTTCTTCTGCAGCAATG
ATAAACAAGTTCCCAAGGTTTGCATTCAATGTGCAAACGTCAACTGAAATAAGAACCATT
TTAAACGATGATAATATATTTAAAACAAAAATAGAAGAATTTTATCTTCGAGTTGCAGTT
TTTAACCATTTTCAAAAGGTGAACGATCTACCAGAAGCTTTGAAGATGTTGGAACCGTTT
CCTGTAAACACAAAAACGACGATATTGATGCGGATTTCGGCTGCAAAATATCTGGCGGCA
AATGACAAATATACTGAGGCAACTATTGCTTACAATCTTGTCGTGACAATGGTGGCTGAG
AACTTAGACATGTCGAACATTGAAAAGCAATTAATACTGGTCCGTGTAACGCTTCACAAT
GCACTAACATTAATTCTTCAAAACCACCCACAACTTGCCATTTTATGGTGTGAAGATGCC
CTAAATCATATTGAAAGCTATATGGAATATACAGTTGAAGATGTTACAGTGGATGAATTT
AAAACACAGTTGGTAAAAATAGCCGTTAAGCTAAAGCAAAGCGAGGCACATGATGAGCTA
ACAAAATATAGGGCTTTGCTGTTGAATGGAAACGTAAATCTGATTTTGAAACCAACCAAT
ATCGAGGAACTACATTTGCTTATTGAGTTGACAAACACGCCACATGTTGCAATAAATCGA
ATTGACAGATTGCCGGAAATCCTCCTTAAAGCCGCATCTTCGCCAGTTTTAGTTTCTTGC
AATGATACAAATAGTAAGAAGAAAGTCGTTGATTTGCTGCTTGAAAGAATCTTGGAAATT
GCAACCGAACTTCCAAGTGGCTCTGATCTCCGACCCCTGGCCTATGCTTTGCGAGCGATT
TGTAAACAACGACTTGTTTGTTCTGTTGAACTCTTACAAGAAGTGAACTCTATGGTAAGT
GGATCAAGATTTCAACTTTTTCTTGGACCTTTTTGCGTGCCTACATGA

InterProScan

Pfam
GlnD_Uridyltrans_N (IPR005105) - T[35-111] 7.2E-7
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[379-540] 4.2E-9
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[404-475] 1.14E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value