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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Clone 'AHC0AAA198YL18' > 
  4. Transcript 'KH2012:KH.L4.21.v1.C...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S880.g12555.02.t

Possible name(s)

TPM1; TPM3; TPM4

Gene model

Phmamm.CG.MTP2014.S880.g12555

Location

S880 [38,879 / 42,649]

Sequences

Amino acid sequence

Length: 263

>Phmamm.CG.MTP2014.S880.g12555.02.p
MESIKHKMEGLIKEKEEAIEKAIGLENEKTEKEDHAKGLENEINTITKNIISLEDKLDQN
MEEHRLSIEKLEVAEKVATDSELEVNAQTRRMQLLEEEMQRVTERLDEAVAKLEVAEKAA
EESERGRKVIESRSFKDEETLELQEIQLRDAKGIAEDADRKYEEVGRKLRMVENDLERVL
DRAEEYEGKVKKSDEQLKALNENLRSLEAVSVKNSEQEDNYEKEIHALTENLKNVNQLYA
EKMSYKGISEKLDKTLGDMVNLN

Nucleotide sequence

Length: 792

>Phmamm.CG.MTP2014.S880.g12555.02.t
ATGGAATCTATTAAGCATAAGATGGAAGGCCTTATTAAGGAAAAGGAAGAAGCCATAGAA
AAGGCAATTGGACTTGAAAACGAAAAAACGGAAAAGGAGGATCACGCAAAAGGATTGGAA
AATGAAATCAACACCATCACCAAGAACATCATTTCTCTGGAAGACAAGTTGGATCAGAAC
ATGGAAGAGCACAGACTGTCTATCGAAAAGTTGGAAGTCGCAGAAAAAGTTGCCACTGAT
TCTGAATTGGAAGTGAACGCCCAAACCCGTCGCATGCAGTTGTTGGAAGAAGAAATGCAA
CGTGTCACTGAACGATTGGACGAAGCCGTCGCCAAGCTTGAGGTAGCTGAAAAAGCTGCC
GAAGAGAGCGAACGCGGCCGCAAGGTCATCGAAAGCAGATCGTTCAAGGATGAAGAGACC
CTTGAACTGCAGGAAATTCAGCTACGAGATGCAAAAGGAATTGCTGAAGATGCTGATCGC
AAATACGAAGAGGTTGGCCGAAAACTTCGCATGGTTGAGAACGATCTTGAGCGAGTCTTG
GACAGAGCTGAAGAATACGAAGGCAAAGTTAAGAAGTCTGACGAACAACTGAAGGCGCTC
AACGAAAACTTGAGAAGTTTAGAAGCCGTTTCAGTGAAAAACTCAGAACAGGAAGATAAT
TACGAGAAGGAAATTCACGCTCTTACTGAAAATCTTAAGAATGTAAATCAACTTTACGCC
GAAAAGATGTCCTACAAAGGAATTAGCGAGAAATTGGACAAAACCCTCGGGGACATGGTC
AACCTTAACTAA

InterProScan

Pfam
Tropomyosin (IPR000533) - T[54-236] 7.7E-49
PRINTS
Tropomyosin (IPR000533) - T[84-101] 3.9E-33 - T[120-140] 3.9E-33 - T[145-173] 3.9E-33 - T[175-198] 3.9E-33

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TPM3_HUMAN 48.592 % 202 1.79E-64
TPM1_HUMAN 48.944 % 223 1.23E-72
TPM2_HUMAN 45.775 % 196 3.25E-62