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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L4.21.v1.C...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S880.g12555.01.t

Possible name(s)

TPM1; TPM3; TPM4

Gene model

Phmamm.CG.MTP2014.S880.g12555

Location

S880 [36,471 / 42,683]

Sequences

Amino acid sequence

Length: 311

>Phmamm.CG.MTP2014.S880.g12555.01.p
MESIKHKMEGLIKEKEEAIEKAIGLENEKTEKEDHAKGLENEINTITKNIISLEDKLDQN
MEEHRLSIEKLEVAEKVATDSELEVNAQTRRMQLLEEEMQRVTERLDEAVAKLEVAEKAA
EESERGRKVIESRSFKDEETLELQEIQLRDAKGIAEDADRKYEEVGRKLRMVENDLERVL
DRAEEYEGKVKKSDEQLKALNENLRSLEAVSVKNSEQEDNYEKEIHALTENLKNAETRAE
FAERTVGGGGGGGGGGGGGGTSLRRQLTTWKINFTPKRCPTKELARNWTKPSGTWSTLTK
ILKLAIFRMCY

Nucleotide sequence

Length: 3,341

>Phmamm.CG.MTP2014.S880.g12555.01.t
CTGGAGTTGGCATTGGAGATCATAGAAGTCTCATTTGGGTCAAGCCAAATCTTGTTACGG
CCACATTTCATAACAGAGGCTGCCAGCCGCTTTTGCAGTCGGAGGGTACTGAAAAAATAA
AAAACATTTTCTCACATATAATATATTTAGTGTTTAACTGTTTTTTTGTATTTGAAAACA
AGGAATTGTAATTTACTACACATATGGATGTATTTAGTTAAAGTAGTGATAATAGCCCAA
TCATTAAATTAGAATAAAGCTCAAGAACGTTGCACAAATTGTAACTAACACATTTATTAA
ATTTAAAGTTGCTGCTTGAAATTTTTTTTTTCCTCAGTTGTGCAGCTTAAAAAGGGGCAT
AGTTTACATTTTTATGTCGAATAAAATCAATTTTACATATTTTTACACTTTAAACATGTT
TTAACAGCAAAACACGATATAGTTTTGCACGCAACAATACATTCCTTTTTCCCTGCAAAA
GTTCAATTTTTTATTGAGTTAAATGTTTGGGGAATAAACCGTATCAATTTTAAGCTCTAT
TTGTGCTATATAATCGCCCACAACACTAATATCTTGCTTAGGTTTCCATAAAAACAAGAA
AAAAAATTGACGAAAAATTTAGTATTAATTCAATGCGCTAAAAAACATTTTTTTCGTGTT
TATATTCCCAATTTTTTTAAACATATGTTGAGAAAAACATTTTGTGCGTTTATTATTCAC
AACAAATTGTTCAAATCTGGTGTAATATTAAAAATATAGATGAAAATCGGATTTAAACAA
ACCTCATGATTGCACCAAGGACCACAACACGGGGAAAAAGACCCGGATGTTGAAAAACTC
GCGAACGGTGCTTTTATTTCGGATGACTGGCAGAATTGATTTAATTTTATTATTACTGGG
GGCTAAAAGTAAAATTTATGTGACCAATGCAAAAAAATAAATAAAAACAATTGCACTACA
AAAATTCCCAAAGGGAAAATAAAATACTCAACTGTGTAAGACGCATTTCGTGGACGAATG
TTAAACGCTGCAGCACAACCATTGCACATTTGGAAACAAAGACAATGCGTGGGGTTTGAA
GCAGTGGTGGAATTCAAATTTTTTGTCAGTCGGTTCTATCACAAAAGTCACACTTTCAGC
CAGTTCTGTTACAAAAAGTCCATTGACATAAACCAGTAATGCTAACTAACCGGTTCGCTG
ATCTCATAAAATTTCGTGCAACGGTTCTTTTGAACAGGTGCGAACCGACTGAATCCCACC
ACTGGTTAGAAGGCAACAATAAATTACAAAATATGTATTATTTCTTTGTAATCCGTTAAT
ATGAAAACATTGATACTGGGATCAGCCCTAAAGCGTCATACTTAATCAAGCCGGCCTCTT
AACCATTTAGCAAGCAACAGGCTAAAAGAATCTTGCCTGCGGTAGGATTCGAACCCATGG
CAGAAGTCTTTCCGGGACATGCGTTCTACCAAAAAGCGCCGTTACCTACCTCGCACGCTA
CCCATGTCAGCTTCGTAGTAGAAGATTGCCAGATTTACTATTGTTTTATTTCTTTTTATG
CATTGTATTGTTACTTCCAATAAACTTGTCACAGACGTAAAAACTTCGTTTGTTTGTTTC
CAAACATTTTGGCACTTTATTTAGGAACGCTTTACTTTTGTCAACGAAAAAAATTAACAG
GGAAGCCATCACAATTTGACTTAGGCTTGCGACACACAAACAAAGTAAATTTTTGTTTGC
AGCATGCGGTATAGACTAGAGCTGCTTTAAGGCCAAAATAAAAAAACTTTGTGTAGTTCC
ATGCAATGGGCAGTGTGTTATGCCCAAACTTGTCCTGTCTTTAACTATATCGGAATGCTC
TGCAAGAACAACTTTATCATAGTCGATGACGAAAACCAGACATGTTATGACGTCATACAC
CTTGCAAAGCAAGAGAAGCATTGATAAGATAGAAGCGACTGGAACATAACTGTTATTTGG
TTTTAGTTAGGCCTACATGTATGTCAAGTCAGATTTATTCATACGTTAAATGTTTGTAAC
ATAAACTCAGGCTTGAAGAATTACTTGCTTGTACACAACATTGCCAAAAAGCTTAATTTT
CGAAGTAAGATTAGATTTAGTCATTTTCGTTTTTGACAAACTTTGATCTTCACCTTATCA
ACTCTCAACATAACGTGTGCTTCAAAAGTGCCATGGCAACTGTGTCGCACGTCATATTCT
GACGTCATTACCATTGATGGTCTGTGACAGTTGGTGTTGTCACCTAAGATAACGTAGTTG
TCACCTATGGGCATTTTGACATAGATACGATCATATAAATACAGGGCCACTTTTGAGTTG
TAGTCATTGTACAGTAGTAATATCATCAAGCTAGTCAAGTCTCTGAAAAGGTAAAGTTAT
CAGCCAAAATGGAATCTATTAAGCATAAGATGGAAGGCCTTATTAAGGAAAAGGAAGAAG
CCATAGAAAAGGCAATTGGACTTGAAAACGAAAAAACGGAAAAGGAGGATCACGCAAAAG
GATTGGAAAATGAAATCAACACCATCACCAAGAACATCATTTCTCTGGAAGACAAGTTGG
ATCAGAACATGGAAGAGCACAGACTGTCTATCGAAAAGTTGGAAGTCGCAGAAAAAGTTG
CCACTGATTCTGAATTGGAAGTGAACGCCCAAACCCGTCGCATGCAGTTGTTGGAAGAAG
AAATGCAACGTGTCACTGAACGATTGGACGAAGCCGTCGCCAAGCTTGAGGTAGCTGAAA
AAGCTGCCGAAGAGAGCGAACGCGGCCGCAAGGTCATCGAAAGCAGATCGTTCAAGGATG
AAGAGACCCTTGAACTGCAGGAAATTCAGCTACGAGATGCAAAAGGAATTGCTGAAGATG
CTGATCGCAAATACGAAGAGGTTGGCCGAAAACTTCGCATGGTTGAGAACGATCTTGAGC
GAGTCTTGGACAGAGCTGAAGAATACGAAGGCAAAGTTAAGAAGTCTGACGAACAACTGA
AGGCGCTCAACGAAAACTTGAGAAGTTTAGAAGCCGTTTCAGTGAAAAACTCAGAACAGG
AAGATAATTACGAGAAGGAAATTCACGCTCTTACTGAAAATCTTAAGAATGCTGAAACGC
GGGCTGAATTTGCTGAAAGAACAGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGACAAGCTTGAGAAGACAATTGACTACTTGGAAGATCAACTTTACGCCGAAAA
GATGTCCTACAAAGGAATTAGCGAGAAATTGGACAAAACCCTCGGGGACATGGTCAACCT
TAACTAAAATACTCAAACTTGCAATCTTTCGCATGTGCTAC

InterProScan

Pfam
Tropomyosin (IPR000533) - T[53-246] 2.0E-55
PRINTS
Tropomyosin (IPR000533) - T[84-101] 9.1E-38 - T[120-140] 9.1E-38 - T[145-173] 9.1E-38 - T[175-198] 9.1E-38 - T[231-256] 9.1E-38

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TPM3_HUMAN 54.656 % 206 3.54E-65
TPM1_HUMAN 55.285 % 226 4.32E-73
TPM2_HUMAN 53.441 % 191 1.43E-59