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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L34.6.v1.C...'
  2. Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S875.g12522.01.t

Possible name(s)

NLRC5; NLRP1; NLRP12

Location

S875 [26,284 / 30,757]

Sequences

Amino acid sequence

Length: 697

>Phmamm.CG.MTP2014.S875.g12522.01.p
MNRNENHAMHADNVVFGDQIHIHPVAPPPAPRNDDKVRADLLNLLRNNREERLQIRVPGV
NRNDVPEKNPVMNQILFYTGEAQPKNEEYNPRSRPTLASLGPLLPHELFSEREGRVPRVV
GVLGEAGAGKSTISRRLCDATDKIILHANFMNMDYNYDVTIAEILLSKRYNCDDRATKEF
FDWIERHQEECRLILDGYDQASWQNLDNPPNINPRNKAAIDVIMGNLFNAGILPKIQLLL
TSRPHAMLGLPVKLQPDRVVMLNGFSPGDAEELFIHLVGDSGADQWQRLQRRAPQLPFMC
ANPAMLVYISAACCEGGNDVTSITSVLQKVLRGVQRSVGRAPIPVEELMSKVEVIAYKAT
RRGTVLITENNLREVELEIADVQDITIVLPAGFHNVLMFDGEYKLYFNHQTLQEFFSSKY
AVSEKMDLATFKYFVKDDLFEFHWTMVRRFAAALLINSAFNASNEAVRLTLRPSLKRRLS
GPLQRMGISNVCDDKEKRICFLKKFLKTFAETGIALSTADEQERKKKRQLFIDLLLDVRE
CDNEEVTRAIAECFPSQVILEQTPFTASEAHAFAFVLRHVTKRIEYMDLRYCNLTTHQFE
LICSGIVEMDSVVDDVNFHNNSLDTDGARVVASILPKVGRFFRMGDAFIEAGGMRRNVNE
DERAVIQAELDRIQNPRLAVCVGGPRDVMQAHPVTQR

Nucleotide sequence

Length: 2,094

>Phmamm.CG.MTP2014.S875.g12522.01.t
ATGAACAGGAACGAAAACCACGCAATGCATGCCGACAATGTTGTCTTTGGTGACCAAATC
CACATCCACCCGGTGGCGCCCCCACCAGCTCCACGCAACGATGACAAAGTTCGCGCAGAT
TTGTTGAATCTTCTCCGGAACAACAGAGAGGAGAGACTCCAGATCCGCGTGCCCGGAGTG
AACAGGAACGATGTGCCCGAAAAAAATCCGGTCATGAACCAAATCCTCTTCTACACCGGT
GAAGCGCAGCCCAAAAACGAGGAGTACAATCCACGTTCTCGTCCCACCCTTGCCAGTCTC
GGCCCCCTACTGCCACATGAGCTGTTCAGTGAGCGAGAGGGGAGAGTCCCTCGTGTTGTA
GGGGTACTGGGTGAAGCTGGGGCGGGGAAATCAACCATCAGCAGAAGGCTCTGTGACGCA
ACAGACAAGATTATCCTCCACGCCAACTTCATGAACATGGATTACAACTATGACGTCACA
ATCGCTGAGATATTGTTGAGTAAGCGATACAATTGTGACGACAGAGCCACTAAGGAGTTT
TTCGATTGGATTGAAAGGCATCAGGAAGAATGCAGGTTGATTCTGGACGGATACGACCAG
GCCAGCTGGCAAAATTTAGACAACCCTCCCAACATCAACCCACGTAACAAAGCCGCTATT
GACGTCATAATGGGCAATCTCTTCAACGCGGGAATCCTCCCCAAGATCCAACTATTGTTG
ACGTCACGTCCGCACGCGATGCTCGGACTTCCGGTAAAGCTCCAGCCTGATCGAGTCGTC
ATGCTCAACGGATTTTCTCCTGGTGATGCGGAAGAGCTCTTTATCCATCTAGTGGGGGAT
TCTGGAGCAGATCAATGGCAGCGACTTCAACGTAGAGCACCTCAACTTCCATTCATGTGC
GCCAACCCAGCTATGCTCGTCTACATATCCGCCGCATGCTGTGAAGGAGGCAATGACGTA
ACCAGTATTACGTCAGTGCTGCAGAAAGTCTTGAGGGGGGTGCAGAGGTCGGTGGGTCGG
GCTCCGATTCCGGTCGAAGAGTTGATGTCCAAAGTTGAGGTGATCGCTTACAAAGCCACC
AGAAGAGGAACGGTACTCATCACTGAAAATAATCTCAGAGAAGTGGAACTTGAAATTGCG
GACGTCCAGGACATCACCATAGTCCTTCCAGCCGGATTCCACAATGTTCTCATGTTTGAT
GGTGAATACAAGCTTTACTTCAACCATCAAACCCTCCAAGAGTTCTTCTCATCCAAGTAT
GCAGTGAGTGAAAAGATGGATCTCGCCACATTCAAATATTTCGTAAAGGACGACTTGTTT
GAGTTTCATTGGACGATGGTTCGACGCTTCGCTGCTGCTTTGCTTATCAACAGCGCCTTC
AATGCAAGTAATGAAGCTGTGAGGCTGACCCTTCGCCCATCGTTAAAAAGGAGACTCAGT
GGACCATTGCAGCGCATGGGAATCAGCAATGTCTGTGATGACAAGGAAAAAAGGATCTGC
TTTTTAAAGAAGTTCCTCAAGACTTTTGCCGAGACGGGCATTGCTCTGAGCACCGCAGAT
GAACAAGAAAGAAAGAAAAAGCGGCAGTTATTCATTGATCTGCTTTTGGATGTGCGCGAA
TGTGACAATGAAGAAGTAACCCGAGCGATTGCTGAATGTTTTCCGAGCCAGGTGATTTTA
GAACAAACACCCTTTACTGCAAGTGAAGCACATGCTTTTGCATTCGTCCTTCGACATGTA
ACAAAAAGAATTGAATACATGGATCTGCGATACTGCAACCTTACAACACATCAATTCGAA
CTCATCTGTTCAGGAATTGTTGAAATGGACTCAGTGGTTGATGATGTCAACTTCCACAAC
AACTCTTTGGACACTGATGGCGCCAGAGTGGTGGCCAGTATTTTACCGAAGGTTGGAAGG
TTTTTCCGAATGGGAGATGCATTTATCGAAGCTGGTGGAATGAGACGAAATGTAAACGAG
GATGAAAGAGCTGTCATACAGGCAGAACTAGATCGAATCCAAAATCCTAGGCTTGCAGTT
TGTGTTGGAGGCCCACGAGATGTTATGCAAGCCCATCCAGTGACACAGAGATAA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[112-296] 1.19E-8
Pfam
NACHT_NTPase (IPR007111) - T[118-277] 3.6E-13
ProSiteProfiles
NACHT_NTPase (IPR007111) - T[118-248] 10.091
Gene3D
LRR_dom_sf (IPR032675) - T[535-642] 1.2E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value