- Transcript 'KH2012:KH.C4.420.v1....' >
- EST 'AHC0AAA230YA08_RM1' >
- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S865.g12455.01.t
Possible name(s)
CDY1; CDY1B; ECI2
Gene model
Location
S865 [11,774 / 15,371]
Amino acid sequence
Length: 342
>Phmamm.CG.MTP2014.S865.g12455.01.p
MGQLQQYKATIGENTSKKPGTFNFVGQAKWTAWSSLGKMTQDEAKSEYVKLVDELAGQEV
ADTTNTETSNSEYKNLIVTQENKITTITLNRPTRKNALTVEMYEEIIVALNTAAKDSSTI
AVVTGAGDYYCSGNDLENFKNINPTAINGPAIGVSVTVLGLFDVVFASDNATFSTPFSSL
GQSPEGCASYTFPKIMGHAKACEMIMFNKKIDAQEALSSGLVTKVFPQDSFQTSVASALK
EIVDLPAKPSKQFEFETPALSQRSQSGTKPEPAKRFEQLISFFKIFFHILQSLLYSKALM
RGPELEQLHKTNIAECDRLIERWQSDDCANAIMKFFAGKEKH
Nucleotide sequence
Length: 1,029
>Phmamm.CG.MTP2014.S865.g12455.01.t
ATGGGCCAGTTACAACAGTATAAAGCAACCATAGGTGAAAATACATCAAAGAAACCTGGT
ACATTTAATTTTGTTGGACAAGCAAAATGGACAGCTTGGTCAAGTCTAGGGAAAATGACA
CAGGATGAAGCAAAATCAGAATATGTAAAATTGGTTGATGAATTGGCTGGACAAGAAGTT
GCAGATACAACCAATACTGAAACATCAAATTCTGAATACAAAAATCTAATTGTTACCCAA
GAGAACAAAATTACTACAATCACACTTAACCGACCAACCAGAAAAAATGCCCTTACTGTT
GAAATGTATGAGGAAATTATTGTGGCTTTAAATACTGCAGCAAAAGACAGCAGCACCATT
GCTGTGGTAACAGGTGCAGGTGATTACTACTGCAGTGGAAATGACCTGGAAAATTTCAAA
AATATAAATCCAACTGCAATAAACGGTCCAGCTATTGGGGTGTCAGTAACTGTGCTTGGA
CTGTTTGATGTGGTTTTTGCATCAGACAATGCAACATTTTCAACACCTTTCTCAAGTCTA
GGACAAAGTCCTGAGGGATGTGCTTCTTACACTTTTCCAAAAATTATGGGTCATGCTAAG
GCATGTGAAATGATCATGTTCAACAAGAAGATTGATGCTCAAGAAGCATTATCCTCAGGA
CTGGTAACAAAAGTATTCCCCCAGGACTCATTTCAAACTTCAGTTGCATCTGCTCTAAAA
GAGATTGTTGACCTCCCTGCCAAGCCCTCAAAGCAGTTTGAGTTTGAGACCCCTGCTTTA
AGCCAAAGGAGTCAATCAGGAACTAAACCTGAACCAGCAAAACGGTTTGAGCAGTTAATT
TCATTTTTCAAGATCTTTTTTCACATTTTGCAGTCCCTATTGTATTCAAAAGCTTTGATG
CGAGGACCAGAACTTGAACAACTGCACAAAACAAATATTGCTGAATGTGATCGTCTCATT
GAGCGGTGGCAATCTGATGATTGTGCCAATGCTATTATGAAGTTTTTTGCAGGAAAAGAG
AAGCACTAG
| ProSiteProfiles |
Acyl-CoA-binding_protein (IPR000582) - T[1-61] 20.182 |
| Gene3D |
FERM/acyl-CoA-bd_prot_sf (IPR014352) - T[5-72] 9.1E-17 |
| SUPERFAMILY |
Acyl-CoA-binding_sf (IPR035984) - T[8-57] 2.88E-14 |
| Pfam |
Acyl-CoA-binding_protein (IPR000582) - T[9-55] 1.1E-13 |
| PRINTS |
Acyl-CoA-binding_protein (IPR000582) - T[17-32] 7.4E-5 - T[38-55] 7.4E-5 |
| SUPERFAMILY |
ClpP/crotonase-like_dom_sf (IPR029045) - T[69-340] 9.0E-48 |
| Pfam |
Enoyl-CoA_hydra/iso (IPR001753) - T[80-141] 6.5E-12 - T[146-253] 6.1E-20 |
| Gene3D |
enoyl-CoA_hydra_C (IPR014748) - T[290-337] 2.1E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ECI2_HUMAN | 40.71 % | 265 | 2.98E-86 |
| CDY1_HUMAN | 37.745 % | 141 | 6.81E-38 |
| CDY2_HUMAN | 36.585 % | 139 | 4.96E-37 |