- Transcript 'KH2012:KH.C2.28.v2.A...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C2.28.v2.A...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S862.g12439.01.t
Possible name(s)
SRP72
Gene model
Location
S862 [24,866 / 37,797]
Amino acid sequence
Length: 747
>Phmamm.CG.MTP2014.S862.g12439.01.p
MAATPNLTALYGELNKFIHVSDYKQALKAANKIIHTKEGKEDVEAMHCKVVCMIQMSHFA
DALKFIETTPEIQELLIFEKAYCQYRLLKTDEALETLKYVKNPDIRTLELKAQVLYKLGN
YQESLKIYKQLMKECTDDYEEERMTNLSAVHAALSAFENVETEIGFKVESYEQLYNKACW
LLGRNRVEEAQKILEDAETACREVFADDPDMTEEDVEAEVSVIKVQLAYAMQLQGKLDEA
LVIYNQVIRSRPTDLGLVAVASNNIISINKDQNVFDSRKKMKATVAAGVENKLVPAQRKK
IDFNRALLFMYSNQWEACRKLLKMMQHEYQDSDIPCLIQAAQLCREKNANKAIEYLKDSD
IPCLIQAAQLCREKNANKAIEYLKSYITEHSDPDLSPKLVFTNIKLALVQLLLGQGELQQ
ACDQIESLGEMCFTPGMVSCLVALHNAQAHDAQNAINVFTRAIEWHKSNKSSQATLTNLM
WECSQFCLDHHKPKDAAEVLEAILRLSDDLPSLAELSVTVDVDELERNASRLAPRYVKKQ
KEKKEANESAPTQTKTGVVSEGRLSDDLPSLAELSVTVDVDELERNASRLAPRYVKKQKE
KKETSESAPTQTKTGVVSEGSTNVDLKKIKKKKKKKNPAPKNFIAGYTADPERWLPLRER
SYYKGRRKDRRKGGVGKGTQGSHFGSSDNYDMSHKPASATAQAPNSPKPGSDASGSQGNT
PISSPKPTQVRGKKPINKKKKKGKGGW
Nucleotide sequence
Length: 2,244
>Phmamm.CG.MTP2014.S862.g12439.01.t
ATGGCTGCTACGCCGAATTTAACGGCCCTATATGGCGAGCTGAACAAGTTTATTCACGTA
TCTGATTACAAACAAGCTTTAAAAGCTGCAAACAAAATAATTCACACAAAAGAGGGCAAA
GAAGATGTGGAGGCTATGCACTGCAAAGTTGTGTGTATGATTCAAATGAGTCACTTTGCC
GATGCCCTCAAATTTATTGAAACTACTCCTGAAATACAAGAGCTTTTGATATTTGAGAAG
GCTTACTGTCAGTATCGTTTGCTGAAAACTGATGAAGCACTCGAAACACTGAAATATGTC
AAGAATCCTGACATTCGAACTCTTGAACTTAAAGCTCAAGTGCTGTACAAGTTGGGAAAT
TATCAAGAGTCGTTGAAAATCTACAAGCAACTGATGAAGGAATGCACTGATGACTACGAA
GAGGAAAGGATGACTAATTTATCTGCTGTGCATGCTGCTTTATCTGCATTTGAAAATGTT
GAGACAGAGATCGGGTTCAAAGTGGAATCATATGAACAGCTGTACAATAAAGCGTGCTGG
CTTCTTGGCAGAAATCGAGTGGAGGAAGCACAGAAAATTTTGGAAGATGCTGAAACAGCT
TGCCGGGAGGTTTTTGCCGATGATCCTGATATGACGGAAGAAGATGTGGAAGCTGAGGTC
TCTGTCATCAAAGTGCAGCTTGCCTATGCTATGCAGCTGCAGGGAAAACTGGATGAGGCG
TTAGTCATTTACAATCAAGTAATTCGGTCGAGACCAACTGATTTGGGACTAGTGGCTGTT
GCTTCCAACAACATAATCAGTATCAACAAGGACCAGAATGTGTTCGACTCCCGCAAAAAG
ATGAAAGCTACAGTTGCTGCTGGTGTTGAAAACAAACTTGTTCCTGCCCAGCGCAAGAAG
ATCGACTTCAATCGAGCATTATTGTTCATGTATTCGAACCAGTGGGAAGCATGTCGCAAG
CTTTTGAAGATGATGCAGCATGAATATCAGGATAGCGATATTCCATGTCTCATTCAAGCA
GCTCAGTTATGCCGTGAGAAGAATGCCAACAAAGCAATCGAATACTTGAAGGATAGCGAT
ATTCCATGTCTCATTCAAGCAGCTCAATTATGCCGTGAGAAGAATGCTAACAAAGCAATC
GAATATTTAAAGAGTTACATCACAGAGCACAGTGACCCTGATTTGTCTCCGAAATTAGTT
TTCACGAACATCAAACTTGCACTGGTTCAACTTTTACTGGGCCAGGGAGAGCTGCAACAA
GCATGTGATCAAATCGAATCTCTTGGGGAAATGTGTTTTACCCCAGGAATGGTTTCATGT
CTGGTTGCCCTGCACAATGCCCAAGCTCATGATGCACAAAATGCGATCAATGTTTTCACA
CGGGCAATTGAGTGGCACAAATCAAACAAGAGCTCGCAAGCAACGCTGACAAACCTGATG
TGGGAATGTTCTCAATTCTGTCTCGATCATCACAAACCGAAGGATGCTGCTGAAGTTCTA
GAAGCTATTCTAAGACTGAGTGACGATCTCCCGTCGTTAGCCGAGCTGTCAGTCACTGTT
GATGTGGATGAACTGGAGCGGAACGCAAGTCGATTGGCTCCTCGTTATGTGAAGAAACAA
AAAGAGAAAAAAGAAGCAAATGAATCGGCCCCAACTCAAACCAAAACTGGAGTTGTGTCC
GAAGGAAGACTAAGTGACGATCTCCCGTCGTTAGCTGAGTTGTCAGTTACGGTTGATGTG
GATGAATTGGAGCGGAACGCAAGTCGATTAGCTCCTCGTTACGTGAAGAAACAAAAAGAG
AAAAAAGAAACAAGTGAATCGGCTCCAACACAAACCAAGACTGGAGTTGTGTCCGAAGGA
AGTACAAACGTTGACCTAAAGAAAATCAAAAAGAAGAAAAAGAAAAAGAATCCTGCACCG
AAAAACTTTATAGCAGGTTACACTGCAGATCCAGAACGCTGGCTTCCACTACGAGAAAGA
TCCTACTATAAGGGAAGAAGAAAGGATCGCCGCAAGGGAGGAGTTGGAAAAGGAACGCAA
GGATCTCATTTTGGAAGCTCGGATAATTATGATATGTCACATAAGCCAGCGTCTGCCACA
GCACAAGCCCCTAATTCCCCGAAACCTGGCTCTGATGCATCTGGAAGCCAGGGAAATACC
CCAATAAGCTCACCCAAACCAACCCAAGTTAGGGGTAAAAAACCCATCAACAAAAAGAAG
AAAAAGGGCAAGGGAGGCTGGTAA
| PIRSF |
SRP72 (IPR026270) - T[1-360] 1.6E-110 - T[355-509] 5.7E-24 - T[502-563] 0.053 - T[556-747] 7.4E-30 |
| PANTHER |
SRP72 (IPR026270) - T[2-357] 2.1E-182 - T[358-545] 2.1E-182 - T[561-744] 2.1E-182 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[6-164] 1.0E-47 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[16-140] 8.41E-7 - T[104-254] 1.39E-11 - T[303-481] 4.14E-6 |
| Pfam |
SRP_TPR-like (IPR031545) - T[31-152] 5.7E-22 |
| SMART |
TPR_repeat (IPR019734) - T[105-138] 4.0 - T[221-254] 12.0 |
| Pfam |
Signal_recog_part_SRP72_RNA-bd (IPR013699) - T[597-665] 1.2E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRP72_HUMAN | 40.138 % | 437 | 6.33E-144 |