- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S84.g02812.01.t
Possible name(s)
KHDRBS2; QKI; SF1
Gene model
Location
S84 [251,315 / 256,263]
Amino acid sequence
Length: 723
>Phmamm.CG.MTP2014.S84.g02812.01.p
GFVKMSRRQNSGFTGANAIPLGTRNKAIGSKRQFTASPPGGYEEERPPPPKFASQESSAS
NSATIALKAAQVAAANLAKLAQLKNPANTGEEPQSWNQVPPPQQQQPQVAVQKPPSQTTE
VDRGRPRKKKSRWSNAKTEIPGMPAAVSANLTPQQQKAYIVQLQIEDITRKLKSGDMGIP
PNPEDRSPSPEPIYNGEGKRMNTREYRTRKRLEEERHKYIQQMQELNTDYKPPMDYKPML
QRVSERVMIPTDVNPNINFVGLLIGPRGNTLKKIEKESNCKIMIRGKGSVKEGKIGRKDG
QPLPGEDEPLHALVSSTSVENVQRAVLEIQNIIKQGIEQPEEDNDLRKLQLMELAKLNGT
LREDLMPKERAWLKPENQTITNTTVCTKCGGRGHLAQDCRGQHPSENLQQGEGGAGDGVD
RAKMDSEYMSLMAELGEGPPPSNNQGKGSNQPGGRGGFNNFQGNRFGGPRPWGGGARPPR
FGGPPGQRPRFGPRGNNMPPMMNQGGPPPPWIAPGPYGPQGGPNQWGPPGGMPPYGGYGN
APPPGEGNSNDGSMGPWMPGQDNSGNMMGGGPMPPMYGPPGENSGSNYFTQPPPPPPSSA
PQPPPPPASGSSAMPWQSWGEQGESSENGKTSKASGSSADSNTASMMAGQQMGYGMGYGM
WGMGMPPGGMAPGPVPPPMPSGPGPVPPPPPGGQESSGSGGMDYSSMMPNYGMPPAPPPP
PPQ
Nucleotide sequence
Length: 2,257
>Phmamm.CG.MTP2014.S84.g02812.01.t
GGCTTTGTAAAAATGTCACGCAGGCAGAACTCTGGTTTTACTGGGGCTAATGCAATTCCT
TTGGGAACAAGGAACAAAGCCATTGGTTCTAAGCGTCAATTCACTGCTTCGCCTCCTGGT
GGTTACGAGGAGGAACGGCCACCACCACCCAAATTTGCCAGCCAAGAATCCAGTGCAAGC
AACAGTGCCACTATTGCACTGAAAGCTGCCCAAGTCGCTGCTGCAAACCTGGCGAAACTT
GCACAACTGAAAAATCCTGCTAATACTGGTGAAGAACCTCAGTCGTGGAATCAGGTTCCA
CCACCACAGCAACAACAACCCCAAGTAGCTGTCCAAAAGCCCCCAAGCCAAACAACAGAA
GTTGACAGGGGCCGGCCACGCAAAAAGAAAAGTAGATGGAGCAATGCCAAGACTGAAATT
CCTGGGATGCCGGCTGCTGTGTCTGCCAATTTAACACCACAGCAACAGAAAGCTTATATA
GTCCAGCTACAGATCGAAGACATCACTAGAAAGCTCAAGTCTGGAGACATGGGAATCCCT
CCGAATCCAGAGGACAGGTCTCCGTCCCCTGAACCAATATATAATGGTGAGGGCAAGAGG
ATGAACACACGCGAGTATCGCACTCGAAAACGGCTTGAAGAAGAACGTCACAAGTATATT
CAGCAAATGCAGGAGTTGAACACAGACTATAAGCCTCCTATGGACTACAAGCCAATGTTA
CAAAGAGTTAGTGAGAGGGTGATGATTCCAACTGATGTCAATCCCAACATTAACTTTGTT
GGTTTGCTCATCGGCCCAAGAGGAAACACATTAAAAAAGATTGAAAAAGAGAGCAACTGC
AAAATCATGATCCGTGGAAAAGGTTCTGTTAAAGAAGGAAAGATTGGTCGAAAGGATGGA
CAACCTCTTCCTGGAGAGGATGAACCGCTCCATGCTCTTGTCTCATCAACATCGGTTGAA
AATGTCCAGAGAGCAGTCCTAGAGATTCAAAACATTATTAAGCAGGGAATTGAACAGCCA
GAAGAAGATAATGATTTAAGAAAACTGCAATTAATGGAGCTGGCCAAACTGAATGGAACT
TTGCGTGAAGACCTCATGCCCAAGGAACGAGCTTGGCTCAAGCCTGAAAACCAGACTATC
ACCAACACTACAGTATGTACAAAGTGTGGAGGACGTGGTCATCTTGCACAGGATTGCAGA
GGCCAACACCCAAGTGAAAATCTTCAACAGGGAGAGGGTGGTGCAGGTGATGGGGTTGAC
CGAGCCAAGATGGACAGTGAGTACATGTCATTGATGGCTGAGCTTGGAGAGGGACCTCCC
CCATCCAACAACCAAGGCAAGGGAAGCAATCAACCTGGTGGTAGAGGCGGTTTTAACAAT
TTTCAGGGAAATCGCTTTGGAGGTCCAAGGCCATGGGGTGGTGGAGCAAGACCACCTCGA
TTTGGAGGACCACCAGGACAAAGGCCAAGATTTGGACCAAGGGGAAACAACATGCCTCCA
ATGATGAACCAGGGTGGTCCTCCACCACCATGGATAGCTCCGGGACCATACGGGCCCCAG
GGAGGGCCAAACCAGTGGGGTCCACCAGGTGGAATGCCCCCGTATGGTGGTTATGGTAAT
GCGCCACCACCTGGAGAGGGCAATTCCAATGATGGCAGCATGGGCCCTTGGATGCCTGGT
CAAGACAACAGTGGTAACATGATGGGTGGAGGCCCCATGCCTCCAATGTATGGCCCACCT
GGCGAAAACTCTGGATCAAACTACTTTACCCAGCCCCCGCCTCCACCCCCGAGCAGTGCC
CCACAGCCCCCTCCCCCACCAGCATCTGGTTCATCTGCAATGCCGTGGCAAAGCTGGGGT
GAGCAGGGTGAATCTAGTGAGAATGGAAAAACCTCGAAGGCTTCTGGTAGCAGTGCAGAT
TCTAATACTGCCTCGATGATGGCTGGGCAGCAAATGGGCTATGGTATGGGTTATGGAATG
TGGGGAATGGGAATGCCCCCTGGAGGGATGGCGCCGGGTCCTGTCCCACCTCCAATGCCT
TCAGGGCCAGGTCCTGTACCACCTCCGCCCCCTGGTGGTCAAGAAAGCAGCGGCTCGGGT
GGCATGGATTATTCTAGCATGATGCCAAACTATGGAATGCCACCTGCGCCACCACCACCT
CCTCCACAGTGATAACCCATGTCTCTGATTTTAGTAAACTGCCATGTGAGATGCTTGGAG
GACGTTTGAAGGATTTAATGATGTTGAAATCAAGGCC
| PANTHER |
BBP/SF1 (IPR031150) - T[5-606] 9.4E-141 |
| Pfam |
SF1-HH (IPR032570) - T[129-237] 6.3E-38 |
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[183-367] 3.4E-50 |
| SMART |
KH_dom (IPR004087) - T[241-334] 2.5E-12 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[243-360] 6.01E-25 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[245-328] 1.2E-7 |
| SMART |
Znf_CCHC (IPR001878) - T[385-401] 0.0053 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[386-400] 9.554 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SF01_HUMAN | 64.458 % | 434 | 1.49E-143 |
| QKI_HUMAN | 39.098 % | 91.7 | 5.91E-20 |
