- Transcript 'KH2012:KH.C2.150.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S839.g12295.01.t
Possible name(s)
DMC1; RAD51; RAD51B
Gene model
Location
S839 [27,981 / 30,409]
Amino acid sequence
Length: 335
>Phmamm.CG.MTP2014.S839.g12295.01.p
MQGLQAEENLAEEENIGPLPISKLEQNGISANDIRKLQEHGYHSVEALAYAPKKELVSVK
GISEAKADKIIIEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGFETGSITE
IFGEFRTGKTQICHTIAATCQLPIEQGGGEGKCMYIDTEGTFRPERLLAVAEKYGLNGAD
VLDNVAYARAYNTDHQSQLLMQAAAMMSETRYAILIVDSATALYRTDYSGRGELSARQMH
LARFLRTLLRLADEFGVAVIITNQVVAQVDGSAMFCADPKKPIGGNIMAHASTTRLYLRK
GRGETRICKIYDSPCLPEAEAMFSINADGIGDAKD
Nucleotide sequence
Length: 1,008
>Phmamm.CG.MTP2014.S839.g12295.01.t
ATGCAGGGATTGCAAGCAGAAGAAAACCTAGCTGAGGAAGAAAATATTGGCCCATTGCCA
ATTTCCAAGCTCGAGCAAAATGGAATCAGTGCAAATGATATTCGCAAGCTACAAGAACAT
GGCTACCATTCTGTGGAGGCACTTGCTTATGCTCCCAAGAAAGAACTGGTTTCAGTAAAG
GGAATAAGTGAAGCAAAAGCCGACAAGATAATTATTGAAGCAGCAAAGCTAGTTCCCATG
GGTTTCACCACAGCAACTGAGTTTCATCAACGACGATCAGAGATTATTCAAATAACCACT
GGATCAAAAGAGCTCGACAAACTTTTACAGGGTGGCTTTGAAACTGGATCTATAACTGAA
ATTTTCGGTGAATTTCGAACAGGAAAGACGCAAATATGTCACACTATAGCAGCTACATGT
CAGCTGCCAATTGAGCAAGGCGGGGGTGAAGGGAAGTGCATGTACATCGACACCGAAGGG
ACATTTCGTCCAGAACGCCTTCTTGCTGTTGCGGAGAAATATGGTTTGAATGGAGCAGAT
GTTTTAGACAATGTAGCTTATGCCAGGGCTTACAACACTGATCACCAATCTCAACTTCTG
ATGCAGGCTGCTGCAATGATGTCTGAAACAAGGTATGCAATTTTGATAGTGGACAGTGCA
ACTGCTTTGTATCGAACAGACTACAGCGGCAGAGGGGAGTTATCTGCAAGACAAATGCAC
TTGGCACGCTTTTTAAGGACTTTACTTCGCCTAGCTGATGAGTTTGGAGTGGCGGTCATC
ATTACAAACCAGGTAGTAGCGCAGGTGGATGGAAGTGCCATGTTCTGTGCTGACCCAAAG
AAACCAATCGGCGGCAACATAATGGCCCACGCATCCACAACACGATTGTATCTACGAAAA
GGTCGTGGCGAAACAAGGATATGTAAAATTTATGACTCTCCCTGTTTACCAGAAGCTGAA
GCAATGTTTTCAATAAATGCTGACGGAATCGGAGATGCTAAAGATTAA
| PIRSF |
DNA_recomb/repair_RecA-like (IPR016467) - T[7-335] 7.0E-141 |
| SUPERFAMILY |
DNA_repair_Rad51/TF_NusA_a-hlx (IPR010995) - T[13-81] 4.71E-17 |
| TIGRFAM |
DNA_recomb/repair_Rad51 (IPR011941) - T[21-335] 9.1E-184 |
| Pfam |
DNA_recomb/repair_Rad51_C (IPR013632) - T[80-332] 5.1E-130 |
| ProSiteProfiles |
RecA_ATP-bd (IPR020588) - T[94-265] 49.374 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[97-332] 1.33E-61 |
| CDD |
Rad51_DMC1_RadA (IPR033925) - T[98-331] 2.55627E-146 |
| SMART |
AAA+_ATPase (IPR003593) - T[115-302] 3.5E-10 |
| ProSiteProfiles |
RecA_monomer-monomer_interface (IPR020587) - T[272-335] 20.583 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DMC1_HUMAN | 50.595 % | 330 | 1.02E-112 |
| RAD51_HUMAN | 87.037 % | 603 | 0 |
| RA51B_HUMAN | 27.515 % | 112 | 2.77E-28 |