Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C2.216.v1....'
  2. Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S839.g12290.01.t

Possible name(s)

EHHADH; HADH; HADHA

Location

S839 [14,934 / 16,749]

Sequences

Amino acid sequence

Length: 285

>Phmamm.CG.MTP2014.S839.g12290.01.p
MLSSVTKLAQHGLKTSAALNNINKVVVIGGGLMGSGIAQVAATTGNTVTVVDLDSSVLEK
TQLSMKKSLERVAKKKFADDQAGGKNFIDDVFGKLSFSTDVISASKESDLVIEAIVENLK
IKQDLFKSLDESVSEFGGVHFFNPVPMMKLVEIVKAPKTSDETFNALMTWGKSLGKTTIA
CKDTPGFIVNRLLVPYLMEAVRLHERGDGSKEDIDIGMKLGAGHPMGPFELLDYVGLDTS
KFIMDGWNELQPDNPLFQPSELLNKLVSEGKFGRKTGCGFYDYKK

Nucleotide sequence

Length: 858

>Phmamm.CG.MTP2014.S839.g12290.01.t
ATGTTGTCAAGTGTCACCAAACTCGCACAGCATGGATTAAAGACAAGCGCTGCTCTCAAC
AACATTAATAAAGTAGTTGTGATTGGTGGTGGACTCATGGGGTCTGGAATTGCACAGGTT
GCTGCAACGACTGGCAACACTGTAACTGTGGTTGATTTGGATTCATCTGTCTTGGAGAAA
ACACAATTATCCATGAAAAAAAGTTTGGAAAGGGTTGCAAAAAAGAAGTTTGCTGATGAT
CAAGCTGGTGGAAAAAATTTTATTGATGATGTTTTTGGCAAACTCTCCTTCAGCACTGAT
GTTATTAGTGCAAGCAAAGAAAGTGACCTAGTTATTGAGGCTATTGTAGAAAATCTTAAA
ATTAAACAGGATTTGTTCAAATCCTTGGATGAATCTGTCTCTGAATTCGGAGGCGTTCAC
TTTTTTAATCCAGTTCCAATGATGAAGCTTGTTGAAATTGTTAAAGCACCAAAAACCAGT
GATGAAACTTTTAATGCACTGATGACTTGGGGAAAATCACTTGGAAAAACCACCATAGCA
TGCAAGGATACACCAGGTTTTATTGTCAACCGATTGTTGGTGCCATATTTGATGGAAGCA
GTAAGGTTACATGAACGTGGTGATGGTTCAAAAGAAGATATTGATATTGGCATGAAACTT
GGAGCAGGCCACCCCATGGGACCATTTGAGTTACTTGATTATGTTGGTCTTGATACATCC
AAATTTATCATGGATGGTTGGAATGAATTGCAACCAGACAACCCCCTATTTCAACCCAGC
GAATTACTAAATAAACTGGTTTCTGAGGGAAAATTTGGACGAAAAACTGGCTGTGGATTC
TATGATTACAAGAAATAG

InterProScan

PIRSF
3-OHacyl-CoA_DH (IPR022694) - T[18-137] 2.4E-25 - T[132-285] 9.6E-49
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[21-185] 5.23E-41
Pfam
3-OHacyl-CoA_DH_NAD-bd (IPR006176) - T[24-134] 1.3E-24 - T[135-184] 2.1E-15
ProSitePatterns
3-OHacyl-CoA_DH_CS (IPR006180) - T[183-207] .
SUPERFAMILY
6-PGluconate_DH-like_C_sf (IPR008927) - T[185-284] 3.4E-32
Pfam
3HC_DH_C (IPR006108) - T[186-283] 8.8E-32
Gene3D
6PGD_dom2 (IPR013328) - T[193-284] 4.1E-35

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ECHP_HUMAN 28.431 % 91.7 1.08E-20
ECHA_HUMAN 30.435 % 124 8.54E-32
HCDH_HUMAN 57.292 % 344 1.69E-119