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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S80.g02718.01.t

Possible name(s)

BNC1; BNC2; SALL1

Location

S80 [263,335 / 265,293]

Sequences

Amino acid sequence

Length: 550

>Phmamm.CG.MTP2014.S80.g02718.01.p
MTEKLKEQLLPGICGPSVSNLPFRNEKESKPESKNHQTGALRHNDTSMTSQIAHSGHIPM
RLSEKSPAPATPGASDISSAASSSDVYAVYRRVFEETMKAYGGGAFAKLPSSGVLPFQLN
PASATAGDPYSAHHTKLNNSNNNAAYGLSKIAASRKLSVDETCYDVTKHFDHNNKRRSVS
TVIPPLPRRDIMRDVEYPAPMMSTQLQIPTPRKPTLHVDEKEPVKRDESRDRDVRRSLAS
QIEEPKLSDCFLPSNGHSKRWEQSPRSHAGSTSSLGKRTHESEAKSPDASSVRIDDHASD
PKRRKSAPVTTFANSTNDRDSDDDSSWKRRFSVQTSFGQSMYRPHASQASAFAPHTKAYS
ASDPANSFTGFLPMWNNPLFPQTPSLLFAPNMPTTIATRSSIPGQGLFNRGWMNTALWAA
AFAANNNRSMLPNDVPTSMSVQATENLQSEADRCLMTNLGSPFSSVTEMDDPTLNMEGNT
WKTGPVQCNICKRMYSNKGTLRVHFKSVHLREMHQCTVPGCDMMFTSVRSRNRHSQNPNL
HRSLAYHPQN

Nucleotide sequence

Length: 1,653

>Phmamm.CG.MTP2014.S80.g02718.01.t
ATGACAGAGAAACTAAAAGAGCAACTTCTTCCAGGAATTTGCGGCCCCTCGGTGTCAAAT
CTTCCCTTCAGAAACGAGAAAGAGTCAAAACCTGAGTCGAAAAATCACCAAACCGGCGCT
CTACGTCACAACGATACGTCTATGACGTCACAGATCGCACATTCCGGTCACATTCCGATG
AGACTGAGTGAGAAGTCGCCAGCGCCAGCGACTCCGGGAGCGTCAGATATCAGCTCTGCG
GCGTCATCTAGCGACGTGTATGCGGTGTATCGTCGCGTGTTTGAGGAAACTATGAAAGCT
TACGGAGGTGGCGCGTTTGCCAAGCTGCCAAGTTCGGGCGTCTTGCCGTTTCAGCTTAAC
CCAGCATCAGCTACGGCAGGCGACCCGTATTCTGCGCATCACACAAAGCTGAACAACAGC
AACAACAACGCCGCTTACGGTTTGTCGAAAATAGCGGCGAGTCGAAAACTCTCAGTAGAC
GAAACGTGCTATGACGTAACAAAGCATTTCGATCACAACAATAAGCGTCGGTCGGTGAGC
ACAGTTATCCCGCCCCTGCCCCGTCGTGACATCATGCGTGACGTAGAGTACCCAGCGCCG
ATGATGTCAACTCAACTGCAAATTCCAACTCCAAGAAAACCGACTTTGCACGTCGACGAG
AAGGAGCCAGTAAAGCGTGACGAATCACGTGACCGCGACGTGCGCCGAAGTTTGGCTTCT
CAGATCGAAGAACCGAAGCTTAGCGATTGTTTCCTGCCTAGCAACGGTCACAGCAAGCGT
TGGGAACAATCCCCGCGCAGTCATGCCGGCTCCACTTCGTCGCTCGGAAAACGCACACAT
GAGAGCGAGGCTAAATCTCCGGACGCGAGTTCCGTACGAATTGACGATCACGCATCAGAC
CCAAAGCGTCGCAAGTCAGCTCCGGTTACAACTTTCGCCAATTCCACCAACGATCGCGAT
AGCGACGACGACAGCTCGTGGAAGCGAAGGTTTTCGGTTCAAACCTCGTTCGGACAGTCG
ATGTACAGACCGCACGCAAGTCAAGCATCGGCGTTTGCACCACACACTAAGGCTTACTCT
GCAAGTGACCCAGCTAACTCGTTCACAGGATTCTTGCCAATGTGGAACAACCCTTTATTC
CCACAAACACCATCACTTCTGTTCGCCCCTAACATGCCCACCACCATAGCCACACGCAGC
TCCATCCCTGGCCAGGGATTGTTCAACCGGGGGTGGATGAACACCGCTTTATGGGCGGCC
GCATTTGCAGCCAACAACAACCGTTCCATGCTGCCCAACGACGTTCCAACCTCAATGAGT
GTTCAAGCAACTGAAAATCTACAAAGCGAAGCCGACCGCTGCCTGATGACAAACCTGGGT
TCCCCGTTTAGCAGCGTCACAGAGATGGACGACCCGACCTTAAACATGGAGGGCAATACG
TGGAAGACAGGCCCGGTGCAGTGCAACATATGTAAACGCATGTATAGCAACAAGGGAACG
CTCCGTGTGCATTTCAAGTCTGTTCATCTACGCGAGATGCACCAATGTACGGTTCCCGGA
TGCGACATGATGTTCACTTCTGTGAGAAGCAGAAACAGACACAGTCAGAACCCGAATCTC
CATCGTAGCTTGGCGTACCACCCGCAAAACTAA

InterProScan

SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[483-513] 5.27E-5
SMART
Znf_C2H2_type (IPR013087) - T[486-509] 0.012 - T[514-541] 0.41
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[486-514] 9.577
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[488-509] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
BNC2_HUMAN 74.603 % 118 9.35E-28
BNC1_HUMAN 67.188 % 108 8.39E-25