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TRANSCRIPT CARD

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  1. Clone 'cima037o03' > 
  2. Clone 'ma339m24' > 
  3. Transcript 'KH2012:KH.C9.442.v1....' > 
  4. Clone 'cijv046h22' > 
  5. Transcript 'Phmamm.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S807.g12080.01.t

Possible name(s)

ATG3; FAHD2A; FAHD2B

Gene model

Phmamm.CG.MTP2014.S807.g12080

Location

S807 [61,435 / 70,797]

Sequences

Amino acid sequence

Length: 558

>Phmamm.CG.MTP2014.S807.g12080.01.p
MQNVFNSVKSSALGVAEMLTPVLKNSKFKETGVLTPEEFVIAGDFLVHHCPTWQWHTGEK
SKLKPYLPSDKQYLLTRNVPCHKRCKQMEYNDEHEAIIEDGGDGGWVDTHHNVDFDKLQG
EVKEMTLKEKSGETSGGNNDEDDDDDDDDEALDMEDYAEMLQSEDSATVDLVAVKKAQAS
ASANDDGSILQTRTYDLHITYDKYYQTPRLWLSGYDEDRKPLTMNQMYDDISQDHVNKTV
TVEPHPHLPPPNMCSVHPCKHAEVMKKIMQTVEDGGGNLEVQIIGVQKDDSSIVDLTADN
ESFPNNMVSFLAGGSSLMEKAKSFVASCKSTISTQDVKILSPITGCEKVVCVGMNYKDHC
LEQNAPIPEEPVIFSKFPSSITGDGDPIILPKLSNSVDWEVELAVVIGQTGKNIQIENAF
DYVAGYTVAHDVSARDWQMQKNGKQWLLGKTFDTFCPLGPWLLTKDAVKDPHNLPLRCIV
NDKVMQNSSTSQLVFGVDFVVSWISKFVTLKPGDVILTGTPPGVGIFRKPPILLKAGDVV
TCEVEGIGKITNPVVEEK

Nucleotide sequence

Length: 1,677

>Phmamm.CG.MTP2014.S807.g12080.01.t
ATGCAGAATGTATTTAATTCCGTCAAAAGCAGCGCATTGGGCGTTGCTGAAATGCTCACT
CCTGTTCTTAAGAATTCGAAGTTTAAAGAAACAGGAGTTTTGACCCCAGAAGAGTTCGTA
ATTGCTGGTGACTTTCTGGTACATCACTGTCCAACTTGGCAGTGGCATACAGGAGAAAAA
TCCAAGCTGAAGCCTTACCTTCCCAGTGACAAGCAGTATCTACTCACCCGCAATGTACCT
TGCCACAAGCGCTGCAAACAAATGGAGTACAATGACGAACATGAAGCAATTATTGAAGAT
GGTGGTGACGGAGGTTGGGTAGACACACATCATAACGTCGATTTTGATAAATTACAAGGA
GAAGTGAAAGAAATGACTTTAAAAGAAAAAAGTGGAGAGACCTCTGGTGGTAATAATGAT
GAAGATGATGACGATGATGATGATGATGAGGCCCTCGACATGGAAGATTATGCAGAAATG
CTTCAATCTGAGGACAGTGCAACTGTTGACTTGGTTGCTGTGAAAAAGGCACAGGCCTCA
GCTTCAGCCAATGATGACGGGAGTATTCTTCAAACGAGAACATACGATCTACACATAACA
TATGACAAGTACTACCAAACTCCAAGACTCTGGCTATCTGGTTATGATGAGGATCGTAAG
CCTTTGACAATGAACCAAATGTACGACGACATCAGCCAGGATCATGTCAACAAAACTGTT
ACAGTCGAACCCCATCCCCATTTACCACCTCCCAACATGTGCTCGGTGCATCCATGCAAG
CATGCAGAGGTGATGAAGAAAATAATGCAGACAGTTGAAGATGGAGGGGGCAATCTTGAA
GTTCAAATCATTGGAGTACAGAAAGATGATTCCAGCATTGTAGACTTAACCGCTGACAAT
GAAAGTTTTCCAAACAACATGGTGTCTTTTTTGGCAGGTGGATCAAGTTTAATGGAAAAG
GCAAAAAGTTTTGTAGCCAGTTGCAAATCAACTATTTCAACTCAAGATGTAAAGATTCTT
TCTCCAATAACCGGATGTGAAAAGGTTGTGTGTGTTGGAATGAACTATAAAGACCACTGC
TTGGAGCAAAATGCCCCAATCCCAGAGGAGCCGGTGATTTTCAGCAAATTTCCAAGCTCC
ATTACAGGTGATGGAGATCCAATAATTTTGCCGAAATTGTCGAATTCAGTGGATTGGGAA
GTTGAACTGGCTGTGGTCATTGGCCAAACAGGGAAAAATATTCAAATAGAAAACGCATTT
GATTATGTCGCTGGTTATACTGTGGCTCATGACGTGAGTGCTAGAGACTGGCAGATGCAG
AAAAATGGAAAACAATGGCTACTTGGAAAAACTTTTGACACTTTTTGTCCCCTCGGACCA
TGGCTGCTAACCAAAGATGCTGTGAAAGACCCCCATAATCTTCCATTGAGATGCATTGTC
AACGACAAAGTGATGCAAAATAGTTCAACATCACAACTTGTGTTTGGGGTCGACTTTGTG
GTGTCATGGATTTCTAAATTTGTTACTCTAAAACCTGGTGATGTTATACTTACTGGGACG
CCACCCGGTGTTGGAATATTCCGAAAACCTCCAATCTTACTTAAGGCTGGAGATGTTGTC
ACTTGTGAAGTGGAAGGAATTGGAAAAATCACAAATCCCGTTGTGGAAGAAAAATAA

InterProScan

Pfam
Autophagy-rel_prot_3_N (IPR007134) - T[8-144] 6.0E-52
Pfam
Autophagy-rel_prot_3 (IPR007135) - T[199-260] 1.6E-18
SUPERFAMILY
Fumarylacetoacetase_C_sf (IPR036663) - T[335-556] 4.84E-83
Gene3D
Fumarylacetoacetase_C_sf (IPR036663) - T[343-558] 1.2E-88
Pfam
Fumarylacetoacetase-like_C (IPR011234) - T[348-555] 3.4E-70

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FAH2A_HUMAN 56.929 % 328 3.51E-109
FAH2B_HUMAN 56.554 % 323 3.86E-107
ATG3_HUMAN 61.538 % 355 1.32E-119