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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C12.153.v2...'
  2. Transcript 'Phmamm.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S79.g02686.01.t

Possible name(s)

CCT3; CCT4; CCT5

Location

S79 [198,264 / 204,204]

Sequences

Amino acid sequence

Length: 497

>Phmamm.CG.MTP2014.S79.g02686.01.p
MLMDPMGGIVMTNDGNAILREITVQHPAAKTMIEISRTQDEEVGDGTTSVIILAGEMMSA
AEQFLEQNMHPTVIIAAYRKALDDMQSFLTELSVEIDVTKTEEMRKIVKSAIGTKFINKW
AELACDMAIQSVSTVSMENASTGRREIDIKRYAKVEKVPGGTLEDSQVLDGVMLNKDITH
PGMKRKIENPRILLLDCSLEYQKGESQTDMELSKDVDFEKVLQMEEDYIRRITAEIIAFK
PDLVFTEKGISDLAQYFLSKANITAIRRVRKSDNNRIARACGGTVCSRTDEIREEDIGKG
AGLFEIKKFGDEYFTFITKCQDPKACTILLRGASKDILMEVERNLQDAMQVARNVMINPR
LVPGGGAVEMAVAQKMKEKSKSMTGVEQWPYRAVAEALEVIPRTLIQNCGASTIRTLTAL
RAKHATDGNTTWGVNGEAGEIVDMKKLDIWEPLSVKQQTYKTAMETAMLLLRIDDIVSGS
KKAEGKEGTGNAAPTAQ

Nucleotide sequence

Length: 1,494

>Phmamm.CG.MTP2014.S79.g02686.01.t
ATGTTGATGGACCCAATGGGAGGAATTGTAATGACAAATGACGGAAATGCTATCCTTCGC
GAGATCACAGTCCAACATCCAGCAGCTAAGACTATGATAGAGATCAGCAGAACCCAGGAT
GAGGAAGTTGGAGATGGAACAACTTCAGTTATTATTCTTGCTGGTGAAATGATGTCGGCT
GCTGAGCAGTTTCTTGAACAGAACATGCATCCTACAGTAATCATTGCTGCTTATCGTAAA
GCTTTGGATGATATGCAATCCTTTCTTACTGAGCTAAGTGTTGAAATTGATGTGACGAAG
ACAGAGGAGATGCGAAAAATAGTAAAAAGTGCCATTGGAACTAAATTTATCAACAAATGG
GCTGAACTTGCTTGCGACATGGCTATTCAGTCTGTCAGCACAGTTTCCATGGAGAATGCC
AGCACTGGAAGACGAGAAATTGACATTAAGCGATATGCCAAAGTTGAAAAAGTACCAGGT
GGAACTTTAGAAGATTCTCAAGTGTTGGATGGTGTGATGTTGAATAAGGACATCACACAT
CCTGGGATGAAGAGGAAGATTGAAAACCCTCGCATCCTGCTCCTTGACTGTTCTCTTGAA
TATCAGAAAGGCGAGAGCCAGACTGATATGGAGCTCAGTAAGGATGTGGACTTTGAGAAA
GTCCTCCAGATGGAGGAGGATTACATCCGCAGAATTACAGCTGAAATAATAGCCTTCAAA
CCAGATCTCGTCTTTACTGAGAAAGGAATTTCAGATTTAGCCCAGTATTTCTTGTCCAAG
GCTAACATAACAGCAATCCGACGTGTTCGTAAATCAGACAACAACAGGATTGCTCGTGCA
TGTGGTGGCACTGTGTGTTCACGAACAGATGAAATTCGTGAGGAGGACATTGGAAAGGGG
GCGGGGTTGTTCGAAATTAAGAAATTTGGTGATGAATATTTCACTTTCATTACTAAATGT
CAAGATCCAAAAGCATGCACAATTTTGTTGAGGGGTGCAAGCAAGGACATTTTAATGGAA
GTTGAAAGAAATCTGCAGGACGCCATGCAAGTTGCTCGTAATGTTATGATCAACCCAAGA
CTTGTGCCAGGTGGTGGCGCTGTGGAGATGGCAGTGGCACAGAAAATGAAGGAGAAATCC
AAGTCGATGACTGGAGTTGAACAGTGGCCTTATCGCGCTGTCGCAGAAGCACTTGAAGTT
ATTCCAAGAACATTGATTCAAAACTGTGGTGCAAGCACAATTCGTACACTGACAGCTCTT
CGGGCTAAACACGCTACTGATGGCAACACAACATGGGGAGTGAATGGGGAAGCTGGTGAG
ATTGTGGACATGAAGAAATTAGATATTTGGGAGCCGCTATCAGTTAAACAGCAAACCTAC
AAGACTGCTATGGAGACCGCTATGTTGCTTCTTCGTATTGATGACATCGTTTCTGGAAGC
AAAAAGGCTGAGGGCAAGGAAGGCACTGGCAATGCGGCTCCTACTGCACAATAA

InterProScan

CDD
Chap_CCT_gamma (IPR012719) - T[1-479] 0.0
Gene3D
GROEL-like_equatorial_sf (IPR027413) - T[1-476] 5.2E-170
Pfam
Cpn60/TCP-1 (IPR002423) - T[1-478] 5.5E-156
TIGRFAM
Chap_CCT_gamma (IPR012719) - T[1-482] 5.5E-254
SUPERFAMILY
GROEL-like_equatorial_sf (IPR027413) - T[1-479] 1.31E-73
PRINTS
Chaperone_TCP-1 (IPR017998) - T[9-27] 7.7E-23 - T[39-58] 7.7E-23 - T[327-349] 7.7E-23 - T[361-373] 7.7E-23
ProSitePatterns
Chaperonin_TCP-1_CS (IPR002194) - T[11-27] . - T[39-47] .
Gene3D
TCP-1-like_intermed_sf (IPR027410) - T[96-358] 5.2E-170
SUPERFAMILY
TCP-1-like_intermed_sf (IPR027410) - T[96-358] 8.24E-25
SUPERFAMILY
GroEL-like_apical_dom_sf (IPR027409) - T[165-332] 2.88E-52
Gene3D
GroEL-like_apical_dom_sf (IPR027409) - T[170-322] 5.2E-170

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TCPG_HUMAN 70.565 % 743 0
TCPD_HUMAN 31.405 % 260 1.03E-80
TCPE_HUMAN 33.75 % 276 1.14E-86