- Transcript 'KH2012:KH.C12.153.v2...' >
- Transcript 'Phmamm.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S79.g02686.01.t
Possible name(s)
CCT3; CCT4; CCT5
Gene model
Location
S79 [198,264 / 204,204]
Amino acid sequence
Length: 497
>Phmamm.CG.MTP2014.S79.g02686.01.p
MLMDPMGGIVMTNDGNAILREITVQHPAAKTMIEISRTQDEEVGDGTTSVIILAGEMMSA
AEQFLEQNMHPTVIIAAYRKALDDMQSFLTELSVEIDVTKTEEMRKIVKSAIGTKFINKW
AELACDMAIQSVSTVSMENASTGRREIDIKRYAKVEKVPGGTLEDSQVLDGVMLNKDITH
PGMKRKIENPRILLLDCSLEYQKGESQTDMELSKDVDFEKVLQMEEDYIRRITAEIIAFK
PDLVFTEKGISDLAQYFLSKANITAIRRVRKSDNNRIARACGGTVCSRTDEIREEDIGKG
AGLFEIKKFGDEYFTFITKCQDPKACTILLRGASKDILMEVERNLQDAMQVARNVMINPR
LVPGGGAVEMAVAQKMKEKSKSMTGVEQWPYRAVAEALEVIPRTLIQNCGASTIRTLTAL
RAKHATDGNTTWGVNGEAGEIVDMKKLDIWEPLSVKQQTYKTAMETAMLLLRIDDIVSGS
KKAEGKEGTGNAAPTAQ
Nucleotide sequence
Length: 1,494
>Phmamm.CG.MTP2014.S79.g02686.01.t
ATGTTGATGGACCCAATGGGAGGAATTGTAATGACAAATGACGGAAATGCTATCCTTCGC
GAGATCACAGTCCAACATCCAGCAGCTAAGACTATGATAGAGATCAGCAGAACCCAGGAT
GAGGAAGTTGGAGATGGAACAACTTCAGTTATTATTCTTGCTGGTGAAATGATGTCGGCT
GCTGAGCAGTTTCTTGAACAGAACATGCATCCTACAGTAATCATTGCTGCTTATCGTAAA
GCTTTGGATGATATGCAATCCTTTCTTACTGAGCTAAGTGTTGAAATTGATGTGACGAAG
ACAGAGGAGATGCGAAAAATAGTAAAAAGTGCCATTGGAACTAAATTTATCAACAAATGG
GCTGAACTTGCTTGCGACATGGCTATTCAGTCTGTCAGCACAGTTTCCATGGAGAATGCC
AGCACTGGAAGACGAGAAATTGACATTAAGCGATATGCCAAAGTTGAAAAAGTACCAGGT
GGAACTTTAGAAGATTCTCAAGTGTTGGATGGTGTGATGTTGAATAAGGACATCACACAT
CCTGGGATGAAGAGGAAGATTGAAAACCCTCGCATCCTGCTCCTTGACTGTTCTCTTGAA
TATCAGAAAGGCGAGAGCCAGACTGATATGGAGCTCAGTAAGGATGTGGACTTTGAGAAA
GTCCTCCAGATGGAGGAGGATTACATCCGCAGAATTACAGCTGAAATAATAGCCTTCAAA
CCAGATCTCGTCTTTACTGAGAAAGGAATTTCAGATTTAGCCCAGTATTTCTTGTCCAAG
GCTAACATAACAGCAATCCGACGTGTTCGTAAATCAGACAACAACAGGATTGCTCGTGCA
TGTGGTGGCACTGTGTGTTCACGAACAGATGAAATTCGTGAGGAGGACATTGGAAAGGGG
GCGGGGTTGTTCGAAATTAAGAAATTTGGTGATGAATATTTCACTTTCATTACTAAATGT
CAAGATCCAAAAGCATGCACAATTTTGTTGAGGGGTGCAAGCAAGGACATTTTAATGGAA
GTTGAAAGAAATCTGCAGGACGCCATGCAAGTTGCTCGTAATGTTATGATCAACCCAAGA
CTTGTGCCAGGTGGTGGCGCTGTGGAGATGGCAGTGGCACAGAAAATGAAGGAGAAATCC
AAGTCGATGACTGGAGTTGAACAGTGGCCTTATCGCGCTGTCGCAGAAGCACTTGAAGTT
ATTCCAAGAACATTGATTCAAAACTGTGGTGCAAGCACAATTCGTACACTGACAGCTCTT
CGGGCTAAACACGCTACTGATGGCAACACAACATGGGGAGTGAATGGGGAAGCTGGTGAG
ATTGTGGACATGAAGAAATTAGATATTTGGGAGCCGCTATCAGTTAAACAGCAAACCTAC
AAGACTGCTATGGAGACCGCTATGTTGCTTCTTCGTATTGATGACATCGTTTCTGGAAGC
AAAAAGGCTGAGGGCAAGGAAGGCACTGGCAATGCGGCTCCTACTGCACAATAA
| CDD |
Chap_CCT_gamma (IPR012719) - T[1-479] 0.0 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[1-476] 5.2E-170 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[1-478] 5.5E-156 |
| TIGRFAM |
Chap_CCT_gamma (IPR012719) - T[1-482] 5.5E-254 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[1-479] 1.31E-73 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[9-27] 7.7E-23 - T[39-58] 7.7E-23 - T[327-349] 7.7E-23 - T[361-373] 7.7E-23 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[11-27] . - T[39-47] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[96-358] 5.2E-170 |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[96-358] 8.24E-25 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[165-332] 2.88E-52 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[170-322] 5.2E-170 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPG_HUMAN | 70.565 % | 743 | 0 |
| TCPD_HUMAN | 31.405 % | 260 | 1.03E-80 |
| TCPE_HUMAN | 33.75 % | 276 | 1.14E-86 |