- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Phmamm.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S79.g02680.01.t
Possible name(s)
FAT1; SNED1; TENM1
Gene model
Location
S79 [140,185 / 145,152]
Amino acid sequence
Length: 659
>Phmamm.CG.MTP2014.S79.g02680.01.p
MGRLMFMLLLFVVSVALTTATEAFIFGVNEIGKHYLFKSFAVIEDVESNRVAEEIETVDL
EEMDVKSSDEVQAVQPMAEPAETLIAAEESLSDVDYDAGEEDTDYKPASPSDTEEGENEE
QDYPEVKSVVVERKGNCSDAAEGKSVVDPKRAHYPNPKSICPSDIQCLEGELCIMHACRC
ISGFTGSFCELSTQSCNLICYNQGTCTLDNRGHASCQCIPPWGGLLCDRPADNPLCDAVN
CEGDCVCQESCRHEDGYVCVSDLGYLGRLCNIPIPDLECTSNEIIVSVSQLFYAEWDMNK
RNSIIYMSPTVDGIGSNLQQCQAQLVGSNYRIAISHPFTQCGTQTTTEVGSDGYNRVSFT
NALWINKNFGSAATSYDMPFGIIRFKCVYGNSYTIYTSIRPLIDEPPVITEEQDYQISAS
LCKISTCNAVCPASLAMQQSAIYTVGQIIHLDFGITNINNPVVFNNLPVGADTIIDYVFL
SCSSSTPLGSTGLAPQEAQIALFQEGCPTDHGLALQAVMGSSTLDNRACISFRLPRSKVC
SEIYIHARLHVCIGVLQQATCPNGAIAPRCTQARRKRSASSAHDGSTNPITIGPIYVLEK
EEGDSHVTFLVDGAEFNMKTSNRRNMTGHEMKKPPQNPKVLIPKLPDTMGQNTGWLIYL
Nucleotide sequence
Length: 1,980
>Phmamm.CG.MTP2014.S79.g02680.01.t
ATGGGGAGATTAATGTTCATGCTGTTGCTGTTTGTTGTTTCTGTTGCTCTGACAACTGCT
ACGGAAGCTTTCATTTTTGGTGTTAATGAAATTGGTAAACATTACCTCTTTAAATCGTTT
GCAGTCATAGAAGATGTGGAATCTAATCGAGTGGCTGAAGAAATAGAAACGGTTGATTTA
GAGGAAATGGATGTTAAAAGCTCTGATGAGGTACAAGCTGTTCAACCGATGGCAGAGCCT
GCAGAAACTCTAATCGCTGCTGAAGAGTCTCTTTCTGATGTAGATTATGATGCAGGTGAA
GAAGACACGGACTACAAACCGGCCTCGCCGTCCGATACCGAAGAGGGGGAGAATGAGGAG
CAAGATTATCCAGAAGTAAAATCAGTAGTCGTGGAGAGAAAGGGGAACTGTTCAGATGCT
GCCGAAGGGAAAAGTGTGGTCGATCCGAAACGAGCGCATTATCCCAATCCCAAATCAATT
TGTCCTTCTGACATTCAATGTCTCGAAGGCGAACTCTGCATAATGCACGCATGTCGATGC
ATATCTGGATTTACTGGAAGCTTCTGCGAGTTGAGTACACAATCTTGTAATCTGATTTGC
TACAACCAAGGGACTTGTACTTTAGACAACAGAGGACACGCAAGTTGCCAGTGCATTCCT
CCTTGGGGTGGTCTTCTTTGCGACAGACCAGCAGACAATCCGTTATGCGACGCCGTGAAC
TGCGAAGGTGATTGCGTTTGCCAGGAGTCTTGTAGACATGAGGATGGCTACGTTTGCGTC
TCTGATCTTGGATACCTCGGACGACTTTGCAACATCCCTATCCCGGACCTAGAGTGCACT
TCAAACGAAATCATCGTATCGGTGTCGCAGCTGTTTTACGCGGAATGGGACATGAATAAA
CGCAATAGCATAATCTATATGTCACCTACAGTCGATGGAATAGGCAGTAACCTTCAACAG
TGCCAAGCTCAGCTTGTCGGTTCCAACTATCGTATTGCAATTTCACACCCATTCACGCAA
TGCGGAACACAAACCACTACTGAAGTCGGTTCGGATGGTTACAACAGAGTTTCATTTACC
AACGCGCTTTGGATCAACAAAAACTTCGGCTCTGCTGCTACATCATACGACATGCCGTTT
GGAATAATTCGCTTCAAATGTGTCTACGGAAATTCCTACACCATCTACACGTCCATCCGA
CCACTAATTGATGAGCCTCCTGTGATCACAGAAGAGCAAGACTACCAAATTTCTGCTTCC
CTTTGCAAAATCTCTACCTGCAATGCAGTTTGTCCAGCTTCACTCGCCATGCAGCAATCT
GCTATATACACCGTTGGACAAATAATCCATCTAGACTTCGGCATCACGAACATCAACAAC
CCAGTAGTGTTCAATAACCTTCCTGTAGGAGCAGACACCATCATAGACTACGTTTTCCTC
TCGTGCTCGTCTTCAACCCCATTAGGATCTACCGGCTTAGCGCCCCAAGAAGCACAAATT
GCGCTATTTCAAGAAGGATGCCCAACTGACCACGGCCTCGCTTTGCAAGCAGTCATGGGG
TCATCCACATTAGACAATCGAGCTTGTATTTCATTCCGTCTTCCCAGAAGCAAGGTCTGC
TCTGAAATCTACATCCACGCCCGGCTCCACGTCTGCATCGGTGTTCTCCAACAAGCAACT
TGTCCGAATGGAGCGATAGCACCTCGCTGCACACAAGCAAGAAGGAAGAGATCTGCTTCG
TCTGCGCATGACGGCTCTACCAACCCAATCACTATTGGTCCAATATACGTCCTCGAAAAA
GAAGAGGGAGACAGTCACGTGACTTTCCTGGTCGACGGCGCAGAGTTCAATATGAAGACC
AGCAATCGCAGAAACATGACCGGGCACGAGATGAAGAAACCGCCGCAAAATCCAAAAGTC
TTGATACCGAAACTTCCGGACACAATGGGACAAAACACAGGTTGGTTAATTTATCTCTGA
| SMART |
EGF-like_dom (IPR000742) - T[160-190] 8.9 - T[195-228] 19.0 - T[240-271] 240.0 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[192-228] 12.497 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[216-227] . - T[216-227] . |
| ProSiteProfiles |
ZP_dom (IPR001507) - T[278-568] 14.702 |
| Pfam |
ZP_dom (IPR001507) - T[279-558] 1.9E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|