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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.775.v1....'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'Harore.CG.MTP2014.S5...'
  4. Transcript 'KH2012:KH.C6.15.v3.A...'
  5. Transcript 'Phmamm.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S79.g02680.01.t

Possible name(s)

FAT1; SNED1; TENM1

Location

S79 [140,185 / 145,152]

Sequences

Amino acid sequence

Length: 659

>Phmamm.CG.MTP2014.S79.g02680.01.p
MGRLMFMLLLFVVSVALTTATEAFIFGVNEIGKHYLFKSFAVIEDVESNRVAEEIETVDL
EEMDVKSSDEVQAVQPMAEPAETLIAAEESLSDVDYDAGEEDTDYKPASPSDTEEGENEE
QDYPEVKSVVVERKGNCSDAAEGKSVVDPKRAHYPNPKSICPSDIQCLEGELCIMHACRC
ISGFTGSFCELSTQSCNLICYNQGTCTLDNRGHASCQCIPPWGGLLCDRPADNPLCDAVN
CEGDCVCQESCRHEDGYVCVSDLGYLGRLCNIPIPDLECTSNEIIVSVSQLFYAEWDMNK
RNSIIYMSPTVDGIGSNLQQCQAQLVGSNYRIAISHPFTQCGTQTTTEVGSDGYNRVSFT
NALWINKNFGSAATSYDMPFGIIRFKCVYGNSYTIYTSIRPLIDEPPVITEEQDYQISAS
LCKISTCNAVCPASLAMQQSAIYTVGQIIHLDFGITNINNPVVFNNLPVGADTIIDYVFL
SCSSSTPLGSTGLAPQEAQIALFQEGCPTDHGLALQAVMGSSTLDNRACISFRLPRSKVC
SEIYIHARLHVCIGVLQQATCPNGAIAPRCTQARRKRSASSAHDGSTNPITIGPIYVLEK
EEGDSHVTFLVDGAEFNMKTSNRRNMTGHEMKKPPQNPKVLIPKLPDTMGQNTGWLIYL

Nucleotide sequence

Length: 1,980

>Phmamm.CG.MTP2014.S79.g02680.01.t
ATGGGGAGATTAATGTTCATGCTGTTGCTGTTTGTTGTTTCTGTTGCTCTGACAACTGCT
ACGGAAGCTTTCATTTTTGGTGTTAATGAAATTGGTAAACATTACCTCTTTAAATCGTTT
GCAGTCATAGAAGATGTGGAATCTAATCGAGTGGCTGAAGAAATAGAAACGGTTGATTTA
GAGGAAATGGATGTTAAAAGCTCTGATGAGGTACAAGCTGTTCAACCGATGGCAGAGCCT
GCAGAAACTCTAATCGCTGCTGAAGAGTCTCTTTCTGATGTAGATTATGATGCAGGTGAA
GAAGACACGGACTACAAACCGGCCTCGCCGTCCGATACCGAAGAGGGGGAGAATGAGGAG
CAAGATTATCCAGAAGTAAAATCAGTAGTCGTGGAGAGAAAGGGGAACTGTTCAGATGCT
GCCGAAGGGAAAAGTGTGGTCGATCCGAAACGAGCGCATTATCCCAATCCCAAATCAATT
TGTCCTTCTGACATTCAATGTCTCGAAGGCGAACTCTGCATAATGCACGCATGTCGATGC
ATATCTGGATTTACTGGAAGCTTCTGCGAGTTGAGTACACAATCTTGTAATCTGATTTGC
TACAACCAAGGGACTTGTACTTTAGACAACAGAGGACACGCAAGTTGCCAGTGCATTCCT
CCTTGGGGTGGTCTTCTTTGCGACAGACCAGCAGACAATCCGTTATGCGACGCCGTGAAC
TGCGAAGGTGATTGCGTTTGCCAGGAGTCTTGTAGACATGAGGATGGCTACGTTTGCGTC
TCTGATCTTGGATACCTCGGACGACTTTGCAACATCCCTATCCCGGACCTAGAGTGCACT
TCAAACGAAATCATCGTATCGGTGTCGCAGCTGTTTTACGCGGAATGGGACATGAATAAA
CGCAATAGCATAATCTATATGTCACCTACAGTCGATGGAATAGGCAGTAACCTTCAACAG
TGCCAAGCTCAGCTTGTCGGTTCCAACTATCGTATTGCAATTTCACACCCATTCACGCAA
TGCGGAACACAAACCACTACTGAAGTCGGTTCGGATGGTTACAACAGAGTTTCATTTACC
AACGCGCTTTGGATCAACAAAAACTTCGGCTCTGCTGCTACATCATACGACATGCCGTTT
GGAATAATTCGCTTCAAATGTGTCTACGGAAATTCCTACACCATCTACACGTCCATCCGA
CCACTAATTGATGAGCCTCCTGTGATCACAGAAGAGCAAGACTACCAAATTTCTGCTTCC
CTTTGCAAAATCTCTACCTGCAATGCAGTTTGTCCAGCTTCACTCGCCATGCAGCAATCT
GCTATATACACCGTTGGACAAATAATCCATCTAGACTTCGGCATCACGAACATCAACAAC
CCAGTAGTGTTCAATAACCTTCCTGTAGGAGCAGACACCATCATAGACTACGTTTTCCTC
TCGTGCTCGTCTTCAACCCCATTAGGATCTACCGGCTTAGCGCCCCAAGAAGCACAAATT
GCGCTATTTCAAGAAGGATGCCCAACTGACCACGGCCTCGCTTTGCAAGCAGTCATGGGG
TCATCCACATTAGACAATCGAGCTTGTATTTCATTCCGTCTTCCCAGAAGCAAGGTCTGC
TCTGAAATCTACATCCACGCCCGGCTCCACGTCTGCATCGGTGTTCTCCAACAAGCAACT
TGTCCGAATGGAGCGATAGCACCTCGCTGCACACAAGCAAGAAGGAAGAGATCTGCTTCG
TCTGCGCATGACGGCTCTACCAACCCAATCACTATTGGTCCAATATACGTCCTCGAAAAA
GAAGAGGGAGACAGTCACGTGACTTTCCTGGTCGACGGCGCAGAGTTCAATATGAAGACC
AGCAATCGCAGAAACATGACCGGGCACGAGATGAAGAAACCGCCGCAAAATCCAAAAGTC
TTGATACCGAAACTTCCGGACACAATGGGACAAAACACAGGTTGGTTAATTTATCTCTGA

InterProScan

SMART
EGF-like_dom (IPR000742) - T[160-190] 8.9 - T[195-228] 19.0 - T[240-271] 240.0
ProSiteProfiles
EGF-like_dom (IPR000742) - T[192-228] 12.497
ProSitePatterns
EGF-like_CS (IPR013032) - T[216-227] . - T[216-227] .
ProSiteProfiles
ZP_dom (IPR001507) - T[278-568] 14.702
Pfam
ZP_dom (IPR001507) - T[279-558] 1.9E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value