- Region 'REG00000652' >
- Region 'REG00000210' >
- Transcript 'KH2012:KH.L172.8.v1....' >
- Region 'REG00001231' >
- Transcript 'Phmamm.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S74.g02574.01.t
Possible name(s)
MYF5; MYF6; MYOD1
Gene model
Location
S74 [48,563 / 51,585]
Amino acid sequence
Length: 557
>Phmamm.CG.MTP2014.S74.g02574.01.p
FEELDFASYMFSNGSVCLQSLMATPEMTSQLRFVTQSPRRKRSSHDVLLSESISEREVSE
SRDAKTKEEEQKRMDEIAMKSDLSILEELTNFTSSTTHSDVMFTSPEPVFPTQTDQYVVS
PQLGPVQGLKTQGQVTLEKPIKKEQIDNSANFELALENLLESDYVIASEPKLHYPVVTSF
DEEAAAPPISSIEPTLTFGNCEENEDAIKAMMQYFTEGTPAKRPHLSIDTALPSVEELLS
LSSSSEKSRDFKPSHKVPNPVTSAVFPSNKIDMRTSAFTNSEQLIFKSDAMTNFSEDALD
FDAHSNTERVHFAKIPGLQISNSLSGSDGMFDQGDEENSLSSFHHTSHPNGHQCLAWACK
ACKRKSGPHDRRRAATLRERRRLKRVNQAYETLKRCACANPNQRLPKVEILRNAITYICN
LQRILYGDHQQPEEQADKTGNSLASTTHAEALSAFSSPASMSPNFCNGNDVIRLAMTSPS
TPVSPVNTEGCTDALNEQLSMLQRGDDVSLTSPPGVMCFSEDSVDHTSPTTSVNSDTKRN
SSLVCLSSIVESITDEL
Nucleotide sequence
Length: 1,736
>Phmamm.CG.MTP2014.S74.g02574.01.t
ATTCGAAGAGTTGGACTTCGCTTCCTATATGTTCAGCAATGGCAGCGTTTGCCTGCAGTC
GCTGATGGCAACCCCAGAGATGACGTCACAGTTACGTTTTGTGACGCAGTCGCCACGCAG
AAAGCGCAGCAGCCACGACGTCCTGCTCTCAGAATCCATTTCAGAACGGGAGGTATCAGA
GTCACGTGATGCAAAGACCAAAGAGGAGGAACAAAAACGAATGGACGAAATTGCGATGAA
GAGCGATCTTTCGATCCTGGAGGAGCTCACCAATTTTACGTCATCTACCACACATAGTGA
CGTCATGTTTACGTCACCGGAGCCGGTGTTTCCTACCCAAACGGACCAGTACGTCGTGAG
CCCACAACTTGGCCCAGTCCAAGGCCTTAAAACTCAGGGCCAGGTTACTCTGGAAAAACC
AATCAAAAAGGAACAGATTGACAATTCTGCAAACTTTGAACTCGCACTGGAGAACCTTCT
TGAAAGCGATTACGTCATCGCCAGCGAACCAAAGTTGCACTATCCCGTTGTGACGTCATT
TGACGAGGAAGCAGCGGCCCCACCTATTTCCAGCATTGAACCCACTCTGACCTTTGGTAA
CTGCGAAGAGAATGAGGACGCCATCAAGGCTATGATGCAATATTTTACCGAAGGTACACC
AGCAAAACGACCTCACTTGTCAATTGATACAGCGCTACCAAGTGTCGAGGAGCTGCTTTC
ACTTTCTTCATCCTCGGAAAAGTCACGCGACTTCAAACCCAGCCACAAGGTTCCAAATCC
GGTTACCAGTGCAGTGTTTCCCTCAAACAAAATCGACATGCGCACCAGTGCATTTACCAA
CTCGGAACAGTTGATCTTCAAGTCGGATGCCATGACAAATTTTTCGGAGGACGCACTTGA
TTTTGACGCTCATTCCAACACCGAGCGAGTGCATTTCGCCAAAATCCCAGGACTCCAAAT
CAGCAACAGTCTGTCAGGTAGCGACGGAATGTTCGATCAGGGCGATGAAGAAAACAGTTT
GTCCTCATTTCACCACACAAGCCATCCTAACGGCCACCAGTGCCTTGCCTGGGCGTGCAA
AGCCTGCAAACGCAAAAGCGGACCTCATGACCGTCGCCGCGCGGCCACCCTGCGCGAACG
TCGGCGTCTCAAGCGAGTCAATCAAGCGTACGAAACTCTGAAACGGTGCGCATGCGCGAA
CCCGAACCAGCGTCTCCCCAAGGTCGAGATACTTCGCAACGCCATAACCTACATCTGCAA
TCTTCAACGGATCCTGTACGGCGACCATCAACAACCGGAAGAGCAAGCAGATAAAACAGG
AAACTCCTTGGCATCCACGACCCACGCCGAAGCATTGTCGGCCTTCTCCAGCCCGGCGAG
CATGTCGCCCAACTTTTGCAACGGCAATGACGTCATCAGGCTGGCGATGACGTCACCTTC
AACGCCCGTGTCGCCAGTGAACACCGAAGGCTGCACCGACGCATTAAATGAGCAGCTCTC
AATGCTACAGCGCGGCGATGACGTAAGTCTGACATCACCACCCGGAGTGATGTGCTTTTC
CGAAGACTCAGTCGATCACACTTCCCCGACAACAAGCGTCAACAGCGACACCAAGCGGAA
TTCAAGTCTTGTCTGCTTGTCGTCGATTGTCGAGAGCATCACCGACGAACTATGATGTCA
TCAATGACGACCAGTGACGTCACACTCTAGCTGCTGTTTCAAAACTGTCTAATATC
| SMART |
Basic (IPR002546) - T[265-375] 3.0E-7 |
| Pfam |
Basic (IPR002546) - T[308-370] 1.3E-8 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[360-426] 2.8E-17 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[369-433] 2.36E-15 |
| CDD |
bHLH_dom (IPR011598) - T[370-425] 5.038E-15 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[370-421] 14.456 |
| Pfam |
bHLH_dom (IPR011598) - T[371-422] 1.7E-12 |
| SMART |
bHLH_dom (IPR011598) - T[376-427] 6.2E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MYF5_HUMAN | 64.948 % | 128 | 9.98E-34 |
| MYF6_HUMAN | 68.675 % | 120 | 3.92E-31 |
| MYOD1_HUMAN | 67.059 % | 122 | 7.14E-31 |