- Transcript 'Phfumi.CG.MTP2014.S6...' >
- Transcript 'Phmamm.CG.MTP2014.S7...' >
- Region 'REG00000153' >
- Transcript 'Mooccu.CG.ELv1_2.S72...' >
- Transcript 'Phmamm.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S743.g11653.02.t
Possible name(s)
SF3A1; SFSWAP
Gene model
Location
S743 [57,582 / 73,744]
Amino acid sequence
Length: 849
>Phmamm.CG.MTP2014.S743.g11653.02.p
MQSGYIRAPRRLPSGNDNKSHMHRGPHAKQILKKSSRQPPNDDEMLVFGYASKLYPPDSN
SAVISKNKHLILWNGDEEVDIKIDRYDCRASLYDLSEFDGDSWNKTYQQSEEETRLEEKL
DEERYRALKINEMEENVRQEEEMKRLHASISSNPYQQVGFKYGDEYDPSVPTTDTTDVEE
SVTDDKPFIAPTSLAVPTEMEIPPTEKMNAIIEKTATFVSKQGTQMEIVLKAKQSNNSQF
QFLQFGHYLNPYYKHMVKRIRDGKYCPGAKDNEQDSNEAIRTIDPEHPLAKLIEKGRAAN
AAKQYQQMVDTVYSYYHQQNTESANGGTQQVEPPPLPMFETMSSQFSTDMVLPQPHYPET
PAPPGEEAPGSIAPPPLTLPPHMTTGEEQLVPPSPDMQPIVEAVARKIATEGEEVEMSLA
TQDNPNYAFLRPWHELHPYYKYRKTAWLRLLNPPPPPETKEAELSIPPETPEESPDKTEE
LKPSAPISFSIKPRSESSNKILATVDSKTSKILAEPESDGKEIVLKVENVETRKVRRKFT
EEAPPGKFMSAPKSPPGRSPTITEDIQHAPTEIGKICDETQPQVESLIEPQTQVVPPIQP
SPPSPPPKPASNFTAVTSTGEAASVSLLRQKQAARRMKALQFLKAKQKQEPVVENTEQIV
QTNPANEDIFDLSSSPKPEPISPEKENSPDLSNVAPSSTDQTNNPKTSDPTPADTSSFQH
REIPSAYRQENREKSLERDRRSHKRSSKHRSRTGSSSPGRKHKRSRKHVNSKFGERKKKK
RKKEKSRKSVESDEPEDGQISDRHSHGESPKCEPDLTEETNKDARSIVDVTKPENNGEYS
RSEGEIESD
Nucleotide sequence
Length: 2,550
>Phmamm.CG.MTP2014.S743.g11653.02.t
ATGCAATCTGGATATATTCGGGCACCTCGAAGGTTGCCCAGCGGCAATGACAATAAATCA
CACATGCATCGAGGTCCTCATGCAAAACAAATTCTCAAGAAATCCTCTCGACAACCACCC
AATGATGATGAAATGCTTGTGTTCGGTTACGCAAGCAAGCTCTATCCTCCAGATTCAAAC
TCTGCCGTAATCTCCAAAAACAAACACCTGATTCTTTGGAACGGCGACGAAGAAGTTGAC
ATTAAAATCGACAGATATGACTGCCGAGCATCGTTATATGATCTCTCTGAATTTGACGGT
GATTCATGGAACAAAACTTATCAGCAATCCGAGGAGGAGACACGACTTGAGGAGAAACTT
GATGAGGAAAGATACAGAGCGCTAAAAATTAATGAGATGGAAGAAAATGTCAGACAAGAA
GAAGAAATGAAACGACTTCACGCTTCAATTTCATCAAACCCCTACCAACAAGTTGGTTTC
AAGTACGGTGATGAGTATGACCCATCCGTTCCCACAACAGATACCACTGATGTAGAGGAA
AGTGTCACTGATGACAAACCCTTCATAGCTCCAACTTCCCTCGCTGTGCCCACAGAAATG
GAAATTCCTCCAACGGAAAAGATGAATGCCATTATTGAGAAGACTGCAACATTTGTTAGC
AAGCAAGGAACTCAAATGGAAATTGTTCTGAAAGCAAAACAATCAAATAACTCTCAGTTT
CAGTTTTTGCAGTTCGGCCATTATCTCAATCCCTACTATAAACATATGGTGAAACGAATC
AGAGATGGAAAATATTGTCCGGGTGCGAAAGACAACGAGCAAGACAGCAATGAGGCAATT
CGAACTATTGACCCCGAACATCCACTTGCAAAGTTGATTGAGAAAGGGCGAGCTGCAAAC
GCGGCCAAGCAATATCAGCAGATGGTTGACACTGTGTACAGCTACTATCATCAACAAAAC
ACAGAATCAGCCAACGGCGGAACGCAGCAAGTTGAACCCCCTCCACTGCCCATGTTTGAA
ACAATGTCGTCTCAGTTTTCAACAGATATGGTACTTCCCCAGCCCCACTACCCTGAAACC
CCCGCACCCCCAGGTGAAGAGGCCCCGGGTAGTATAGCTCCTCCCCCTTTAACCCTTCCT
CCCCACATGACCACAGGAGAGGAGCAACTCGTACCTCCTTCCCCTGATATGCAGCCGATC
GTGGAAGCAGTGGCAAGGAAAATAGCTACAGAAGGGGAAGAAGTTGAAATGTCACTCGCA
ACACAAGATAACCCAAACTATGCGTTTCTACGTCCCTGGCACGAACTCCATCCTTACTAC
AAGTATCGGAAAACAGCTTGGTTACGCTTGCTTAACCCACCCCCTCCTCCAGAAACAAAA
GAGGCAGAATTGTCCATTCCTCCTGAAACTCCTGAGGAAAGCCCAGATAAGACTGAAGAA
CTCAAACCATCAGCCCCGATATCTTTCTCAATCAAACCGAGAAGCGAATCGAGCAACAAA
ATACTTGCGACCGTCGACAGCAAAACAAGCAAAATCCTCGCTGAGCCAGAAAGTGATGGA
AAAGAAATAGTTTTAAAAGTTGAAAACGTGGAAACACGAAAAGTTCGAAGAAAATTTACA
GAAGAAGCCCCACCAGGAAAATTCATGTCGGCTCCGAAATCCCCTCCAGGGAGATCCCCT
ACTATCACAGAAGACATCCAACATGCACCAACGGAAATTGGAAAAATTTGTGATGAAACC
CAACCCCAGGTGGAATCCCTCATCGAACCCCAAACCCAGGTTGTTCCCCCGATCCAACCC
TCACCCCCCTCTCCACCACCGAAGCCAGCTTCAAACTTTACAGCCGTAACTTCCACGGGT
GAAGCCGCTTCTGTATCGCTCCTTCGACAGAAACAAGCAGCAAGAAGAATGAAAGCTTTG
CAATTCTTAAAAGCCAAACAGAAACAGGAACCAGTGGTGGAAAATACTGAACAGATCGTC
CAAACAAATCCAGCCAATGAAGATATTTTTGATCTTTCATCGTCACCGAAGCCGGAACCG
ATTTCTCCCGAAAAAGAAAATTCACCCGATTTATCGAACGTCGCTCCCTCATCAACCGAC
CAAACAAACAATCCCAAAACATCCGACCCAACTCCAGCTGATACGAGCTCCTTTCAACAT
AGGGAAATCCCCTCTGCATATCGTCAGGAAAACAGAGAAAAATCACTGGAGCGTGACAGA
AGATCCCACAAACGAAGCAGCAAGCACAGATCGCGAACCGGTTCCTCCTCACCTGGTCGT
AAACACAAACGATCCCGTAAACACGTGAATAGCAAATTCGGCGAGCGAAAGAAAAAGAAA
AGAAAAAAAGAGAAAAGTCGCAAGTCTGTTGAAAGCGACGAACCAGAAGACGGACAGATT
TCCGACCGACATTCTCATGGAGAATCCCCAAAGTGCGAACCCGATCTGACGGAAGAAACA
AACAAAGATGCTCGGTCTATTGTTGACGTCACAAAGCCAGAGAATAATGGGGAATATTCG
AGAAGCGAGGGTGAAATCGAGAGCGATTAG
| SMART |
SWAP_N_domain (IPR019147) - T[43-166] 2.3E-41 |
| Pfam |
SWAP_N_domain (IPR019147) - T[45-164] 1.7E-23 |
| SUPERFAMILY |
SWAP/Surp_sf (IPR035967) - T[183-260] 9.29E-22 - T[378-446] 1.01E-11 |
| Gene3D |
SWAP/Surp_sf (IPR035967) - T[204-262] 6.0E-26 - T[395-449] 2.3E-12 |
| SMART |
Surp (IPR000061) - T[209-262] 7.2E-17 - T[398-449] 8.1E-8 |
| Pfam |
Surp (IPR000061) - T[211-258] 6.8E-15 - T[400-443] 1.5E-6 |
| ProSiteProfiles |
Surp (IPR000061) - T[211-253] 15.678 - T[400-440] 11.966 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SFSWA_HUMAN | 32.998 % | 241 | 3.51E-67 |