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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S734.g11580.01.t

Possible name(s)

TMED10; TMED4; TMED9

Gene model

Phmamm.CG.MTP2014.S734.g11580

Location

S734 [68,200 / 69,218]

Sequences

Amino acid sequence

Length: 192

>Phmamm.CG.MTP2014.S734.g11580.01.p
MYITISITCVLAFIAVQAEALNFQLPADTEKCLREEIHKDVLVTGDYDVSQQASVKVFLK
VTDSNGHILYQKDEATQGKFAFTTDDYDMFQICFSSKADFKGKLPPQDVELQIKRGVEAK
NYDDIAKTEKLKPLEVELRRLEDLSESIVNAFAYMKKREEEMRDTNGVPNLFTISYHLDA
LYCHAYHFLQNN

Nucleotide sequence

Length: 579

>Phmamm.CG.MTP2014.S734.g11580.01.t
ATGTATATCACAATTTCTATTACTTGCGTGTTGGCATTTATTGCTGTTCAAGCAGAAGCC
CTCAATTTTCAACTGCCAGCAGATACTGAAAAATGTTTGCGCGAAGAAATACACAAAGAT
GTTTTGGTTACAGGAGATTATGATGTCAGTCAGCAAGCTTCAGTAAAAGTATTTCTCAAG
GTTACAGATTCCAATGGACATATTCTTTATCAAAAAGATGAGGCAACACAGGGAAAATTT
GCTTTTACTACTGATGATTATGATATGTTTCAAATTTGCTTTTCTAGTAAAGCAGACTTT
AAAGGAAAGTTGCCCCCACAAGATGTGGAACTGCAAATAAAACGTGGAGTGGAAGCAAAG
AACTATGATGATATTGCTAAAACTGAAAAGTTAAAACCTCTGGAAGTAGAACTACGAAGA
CTTGAGGACCTATCAGAATCAATTGTTAATGCATTTGCTTACATGAAAAAAAGAGAAGAA
GAAATGAGAGACACAAATGGGGTTCCCAACCTTTTTACTATCTCGTACCACTTGGACGCT
CTGTACTGCCATGCGTACCACTTCTTGCAAAACAATTAA

InterProScan

PANTHER
TMP21-related (IPR015720) - T[6-166] 1.2E-57
Pfam
GOLD_dom (IPR009038) - T[20-166] 2.0E-35
SMART
GOLD_dom (IPR009038) - T[20-173] 2.8E-34
ProSiteProfiles
GOLD_dom (IPR009038) - T[30-180] 16.544

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TMEDA_HUMAN 62.5 % 217 4.38E-72