Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S72.g02526.02.t

Possible name(s)

SCAMP1; SCAMP2; SCAMP3

Gene model

Phmamm.CG.MTP2014.S72.g02526

Location

S72 [112,841 / 115,929]

Sequences

Amino acid sequence

Length: 333

>Phmamm.CG.MTP2014.S72.g02526.02.p
MGDFDANPFADPFKDGSVTQATSEADKANLDDFNPFANNENATIPANSSAMMQPTNPPDY
GTNYAVSAPPVSAPPPSAPVPGHEELLRRQEELERKAEELQRREQQLSSANYNPRANNWP
PLPSWFPLRPCFYQDFTVDIPHEFQRTVKMLYYLWMFYVIALFLNVLSSLAAYIGCAKQN
LGTGFGLSILWWLLFTPCSLCWYRPAYKAFRSDSSFNFFLFFFMMFFQFCWSVLMCVGIE
NWGYAGWILAIACFGESLPVGIIVCIQATLFTVTAVFSLLLLKKAHSLYRTTGASFEKAQ
QEFATGVMKNPGVQTAAQNAASTAVQSSLKGQY

Nucleotide sequence

Length: 1,002

>Phmamm.CG.MTP2014.S72.g02526.02.t
ATGGGTGACTTTGATGCCAACCCGTTCGCCGATCCATTCAAAGATGGCTCAGTGACACAA
GCCACTTCTGAAGCTGACAAAGCTAATTTGGATGATTTTAATCCGTTTGCAAACAATGAA
AATGCCACGATTCCTGCTAATTCATCAGCAATGATGCAACCCACCAATCCACCTGATTAT
GGAACAAATTATGCCGTCTCAGCTCCCCCGGTTTCCGCACCCCCACCTTCGGCGCCAGTT
CCAGGACATGAAGAGTTGCTACGAAGACAAGAGGAGTTGGAAAGAAAAGCAGAAGAGTTA
CAGAGGAGAGAGCAGCAATTATCATCAGCCAATTACAACCCAAGAGCCAACAACTGGCCT
CCGCTTCCGAGTTGGTTTCCACTCCGTCCATGTTTCTACCAGGATTTCACAGTAGACATC
CCTCACGAGTTTCAGAGAACAGTTAAAATGCTATACTATCTGTGGATGTTCTACGTCATT
GCATTGTTTCTGAATGTCCTATCATCACTTGCTGCTTACATCGGTTGTGCCAAGCAAAAC
CTGGGCACCGGTTTTGGTTTGTCCATCCTCTGGTGGCTGCTTTTCACTCCGTGTTCTCTA
TGTTGGTATAGACCAGCGTACAAAGCATTCAGAAGTGACAGCTCTTTCAACTTCTTTCTA
TTTTTCTTCATGATGTTCTTTCAGTTTTGCTGGTCAGTTCTTATGTGTGTTGGGATTGAA
AACTGGGGTTATGCTGGATGGATTCTTGCTATCGCATGTTTCGGAGAAAGTCTGCCAGTT
GGTATTATTGTCTGCATTCAAGCAACTCTTTTCACTGTCACTGCAGTCTTTTCTCTTCTT
CTGTTGAAAAAGGCCCACTCATTGTATCGTACGACTGGAGCAAGTTTTGAGAAGGCTCAA
CAAGAATTTGCTACTGGTGTGATGAAAAATCCTGGTGTTCAAACTGCTGCACAAAATGCA
GCCTCAACTGCAGTGCAGAGTAGTCTCAAGGGACAGTATTGA

InterProScan

PANTHER	SCAMP (IPR007273) - T[2-332] 3.8E-120
Pfam	SCAMP (IPR007273) - T[117-292] 1.7E-65

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SCAM1_HUMAN	52.599 %	308	2.97E-104
SCAM2_HUMAN	48.256 %	276	1.54E-91
SCAM3_HUMAN	46.866 %	264	1.21E-86