- Transcript 'Phmamm.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S72.g02524.03.t
Possible name(s)
DNAJC11; HSCB
Gene model
Location
S72 [98,855 / 102,317]
Amino acid sequence
Length: 258
>Phmamm.CG.MTP2014.S72.g02524.03.p
VVLFRPLRVVKVLTTAQRKTSHQNTVIPQKKIQHKFSNHLTTTVAKFSTKVLTEIEANEI
RNSQNQCWNCGQKLSLMSKNFCENCESILPLAQDENYFSLLGIKKDFRVSLNELQFNFKK
FQILLHPDKYTLKSETERNISETVSSFINKAYFTLLKPLSRGIYLLELHGEYMTEDVNSD
DPEFLMEILSLNEQIAESDSIPEKRKVFNDVKLIVDDLTIKIAESFHGEDIQKAKQHLIS
YKYYDNILQKLKEILPPV
Nucleotide sequence
Length: 1,666
>Phmamm.CG.MTP2014.S72.g02524.03.t
TGTTGTTTTGTTTCGACCTCTGAGGGTAGTGAAAGTTTTAACAACAGCTCAGCGGAAAAC
TTCACATCAAAACACAGTTATTCCACAAAAGAAGATTCAACACAAATTTTCTAATCATTT
AACCACTACTGTTGCCAAGTTTTCAACAAAAGTTTTGACAGAAATTGAAGCCAATGAAAT
AAGAAACAGCCAAAATCAATGCTGGAACTGTGGGCAAAAGTTAAGTCTGATGTCGAAAAA
CTTTTGTGAAAACTGTGAAAGCATCCTTCCATTGGCACAGGATGAAAATTATTTTTCACT
TCTTGGAATTAAAAAGGATTTTCGAGTTTCTCTAAACGAGTTGCAATTTAACTTCAAGAA
GTTTCAGATTTTACTTCACCCTGACAAATATACGTTGAAATCGGAAACTGAAAGGAATAT
TTCTGAAACAGTTTCATCGTTTATCAACAAGGCGTATTTCACTTTGTTAAAACCACTTTC
CCGGGGAATTTATCTTCTGGAGCTACATGGTGAATACATGACTGAGGATGTCAATTCAGA
TGACCCAGAGTTTTTGATGGAAATTTTATCTTTAAATGAACAGATAGCTGAATCTGATTC
AATTCCTGAAAAGAGGAAAGTTTTTAACGATGTGAAATTGATTGTAGATGATTTAACGAT
TAAAATTGCTGAATCATTTCATGGCGAAGATATTCAAAAGGCAAAACAACATCTTATATC
ATACAAATATTATGACAATATCTTGCAAAAACTAAAAGAGATTCTTCCACCTGTGTAATA
GAGGTTTACTTTTCAATTCTCCCAGAAGTCAATTTTCATTTTTTATCATCATTACTACAC
AATGAAAACTGTTGTTGTCCAATCCCTGCTACCTCTTCAGTTTATGGCGGTTCTAAGGTA
TCTTAAAAATGTTTTTAACTGTTTTGCATTCATAATCTTTTTTTTACCATTTTAACGTAC
TTCTATTTGCATTTCCTAGGTTAAATTTTCTGAAAAATTTGTGCTCAACATTTTTACAAA
CATGCTTTCCCTCTGAATAAGACAAAGTCAAATTTGGCATCACTTAAAAAGTTTATGCAC
AATAGGTCAATTTGTATAGGTTTTTCTTTAACCTGTGGTAAAGCTATTTACACCTCAATT
CACTCCAGCTGCACATTAAACTAATTTTCAATAGGTGGATAGTAAGTTTTTAAAAATGTT
ACATTAAGAACTAAATTTTAGTGTTAGTTTCATTGAAATTTTAATGATAATACCTAACCA
CAACCCTAGCCCTAACTGTCGACATATTTTGAGATGTACAGTTTTCAATAGGATTTGTGC
TCTTTGTGCCACCTATCGAAAATTAGCTAAAACTGATGCGAGTTATGGTGTTAGTAGAAT
TTCCTTAACCCACAAGCAATTGCGAAAATGTTTTTGTAACTTTTTTCTTCCTCATTCAAT
GAAATGTTACACTGACTTGTGTTAGTAAACAATAAAAAATCATCAAATCAAAAGAGTTCA
TAGCCAGAAAACCGAACTATTGCAGTTGACAGGTGAAATTGCATCAATTTTTATGTGATT
CCGGTCGCAGAATCCCCTTGTATCTGTGAAGTTTCTTCTTCACCAAATTGTGTGGTGTCT
TGCTGGTAGATTGGAATTCTCACACACAAACTACCATGTCTGCAAA
| PANTHER |
HscB (IPR004640) - T[12-256] 2.4E-55 |
| Gene3D |
J_dom_sf (IPR036869) - T[56-167] 2.8E-29 |
| SMART |
DnaJ_domain (IPR001623) - T[95-160] 0.0029 |
| CDD |
DnaJ_domain (IPR001623) - T[96-155] 1.47803E-5 |
| SUPERFAMILY |
J_dom_sf (IPR036869) - T[96-169] 2.22E-14 |
| ProSiteProfiles |
DnaJ_domain (IPR001623) - T[96-168] 8.719 |
| TIGRFAM |
HscB (IPR004640) - T[112-254] 4.7E-17 |
| SUPERFAMILY |
HscB_C_sf (IPR036386) - T[172-256] 1.09E-11 |
| Gene3D |
HscB_C_sf (IPR036386) - T[174-256] 5.7E-14 |
| Pfam |
HscB_oligo_C (IPR009073) - T[181-252] 4.3E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HSC20_HUMAN | 35.176 % | 139 | 1.96E-40 |
