- Transcript 'Phmamm.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S724.g11509.01.t
Possible name(s)
ADGRB2; ADGRB3; HMCN1
Gene model
Location
S724 [72,107 / 75,808]
Amino acid sequence
Length: 736
>Phmamm.CG.MTP2014.S724.g11509.01.p
MLKFFALLALCAFSLAVGGTEVENCNIDELRSDGIVIPTAKVPCYFDQCNKNPTELAGPD
SECPDHCASYAGGCYSKIIPRQTLEKKYVKPEEVSGRNFHAGGLVIGAGGLYPFSSSGLP
AVLPPFPRLCPKQFPDNCGVNPHDPHLYKLLEAPVNVPYCQRTPCSSSNPAFENDRFACH
SQPGCYFDVELATLRRAIGYSVLPGVPTCHLAIRNVAFHRLVQKYVKTSGKEWSGLYTNC
LLDQNQHEIDEAPAGCYMIDVLQFIGIKPKRAGWRGINPRECSILGGCFKSGLGCYYPAQ
LRHVKVRSGEDPYRSTTPTARDMYGQPLCLPLNLESSPSDFLDSYHHCLQSGCVVDPSVT
QKTLFHKLLNITLTLVPQHLRQQYYDLIQEGVISADNWEYYLNKLQSEPHYPGFPFGKQT
GKQGSVDILAYTLALQANRNRSRGASLPGQYPNGRFHNSGPGFQFNFPGSQYPSFGNPTG
HNPIHAHQCPYHNYNVGTFHPLKGSFAGCCEQSLCYIPRNQLTRQYSGVAPYLSNWQKWS
DCTVSCGGGRRTRKRRCVAYKNQVCGSDADNTQVEVCNNNQCPHYSPWGTWGSCDASCGG
GSQIRGRSCIPSDGECFGDSQETRACQTGKCPTFSQWSAFGSCSATCGVGEKVRTRSCTN
GGAYGCDAVTEPLQETVRCEIFCGKTVKVATTACEYPDCQVTTAYRCEYQGGVGHCPDFK
QSVTTRCYAGYCYYGK
Nucleotide sequence
Length: 2,211
>Phmamm.CG.MTP2014.S724.g11509.01.t
ATGTTAAAGTTTTTTGCACTTCTTGCGCTTTGCGCATTTTCGCTTGCAGTCGGAGGCACA
GAAGTTGAAAACTGCAATATAGACGAACTGAGAAGTGATGGAATAGTAATTCCAACTGCA
AAAGTCCCTTGCTACTTTGATCAATGCAATAAAAATCCAACTGAACTTGCTGGTCCAGAC
AGCGAGTGTCCTGATCACTGCGCATCGTATGCAGGCGGATGCTATTCGAAAATAATTCCA
AGACAAACACTCGAGAAAAAATACGTTAAGCCCGAAGAAGTATCCGGAAGGAACTTTCAT
GCAGGTGGCCTTGTTATCGGCGCAGGTGGACTTTACCCATTTTCGTCTTCAGGCCTTCCA
GCGGTTCTTCCGCCATTTCCCCGACTCTGTCCCAAACAGTTTCCGGACAATTGCGGCGTT
AATCCACATGATCCACATCTGTACAAACTCCTGGAGGCCCCTGTTAATGTACCTTACTGT
CAAAGAACACCGTGCAGCAGCAGCAACCCAGCATTTGAAAACGATCGCTTCGCATGCCAC
TCTCAACCTGGTTGTTATTTCGACGTGGAATTGGCTACACTTCGACGGGCAATCGGTTAC
AGCGTTCTTCCTGGTGTTCCAACTTGTCATCTTGCTATTCGCAATGTGGCATTTCATCGA
CTTGTCCAAAAATATGTCAAAACCAGCGGAAAAGAATGGAGTGGTTTGTACACAAACTGT
TTACTCGATCAAAACCAGCACGAAATCGATGAAGCACCTGCTGGGTGTTACATGATCGAC
GTCTTGCAGTTTATCGGTATCAAGCCGAAACGAGCTGGATGGAGAGGTATTAATCCCAGA
GAGTGTTCTATTTTGGGAGGTTGCTTTAAATCCGGCTTAGGCTGCTACTATCCGGCTCAG
CTGCGCCACGTGAAAGTACGATCCGGTGAAGACCCTTACCGCAGCACCACACCAACAGCA
AGAGACATGTACGGTCAACCGCTGTGCCTTCCGCTTAATCTCGAGTCGTCTCCAAGTGAT
TTCTTGGACAGTTATCACCACTGTTTGCAATCAGGATGTGTCGTTGACCCGTCGGTTACT
CAGAAAACTCTATTCCACAAGCTGCTGAACATTACTCTCACATTGGTCCCACAACACTTA
AGGCAACAATACTACGACCTGATCCAGGAGGGTGTCATCTCCGCTGACAACTGGGAATAT
TACCTCAATAAACTACAGTCTGAGCCGCATTATCCTGGGTTTCCCTTTGGCAAACAAACT
GGCAAACAAGGTTCAGTGGACATCCTGGCTTACACTTTGGCACTGCAAGCAAACCGCAAT
CGATCAAGAGGTGCATCACTTCCCGGACAGTATCCAAACGGTCGCTTTCACAACAGCGGT
CCTGGTTTCCAATTTAACTTTCCTGGTAGCCAGTATCCTTCTTTTGGAAACCCAACCGGC
CACAACCCAATCCACGCTCATCAATGTCCTTATCATAACTACAATGTCGGTACTTTTCAC
CCACTGAAGGGAAGCTTTGCGGGCTGTTGCGAGCAATCTCTGTGTTACATCCCCCGCAAC
CAACTTACCCGCCAATATTCGGGTGTTGCTCCTTACCTTTCCAATTGGCAAAAGTGGTCC
GACTGTACCGTTTCTTGTGGAGGAGGTCGACGTACCAGAAAGCGACGATGTGTTGCGTAT
AAGAATCAAGTATGTGGCTCGGATGCTGACAACACCCAAGTAGAGGTTTGCAACAACAAC
CAGTGCCCACACTACAGCCCGTGGGGTACCTGGGGTTCTTGCGATGCTTCCTGTGGAGGT
GGAAGTCAAATCCGTGGACGATCCTGTATTCCATCCGACGGAGAGTGTTTCGGTGACAGT
CAGGAGACCAGAGCTTGTCAAACAGGAAAATGTCCAACCTTTAGCCAGTGGTCGGCTTTC
GGAAGTTGCAGTGCCACCTGTGGAGTCGGTGAAAAGGTTCGCACACGCAGCTGTACTAAT
GGCGGTGCGTACGGTTGCGATGCGGTGACTGAACCACTTCAGGAAACAGTGCGCTGTGAG
ATCTTCTGCGGCAAGACGGTGAAAGTGGCTACAACCGCTTGTGAATATCCCGACTGCCAA
GTGACCACTGCATACAGGTGCGAGTACCAAGGAGGAGTTGGCCACTGCCCCGACTTCAAG
CAAAGTGTCACCACTCGGTGTTATGCGGGTTATTGCTATTACGGTAAATAG
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[530-582] 9.94E-10 - T[582-627] 5.75E-9 - T[631-679] 2.35E-8 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[530-583] 3.1E-11 - T[584-632] 2.9E-9 - T[633-683] 4.4E-8 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[530-581] 10.305 - T[582-632] 12.463 - T[634-684] 9.409 |
| SMART |
TSP1_rpt (IPR000884) - T[533-583] 6.7E-10 - T[585-632] 2.6E-9 - T[634-684] 1.3E-5 |
| Pfam |
TSP1_rpt (IPR000884) - T[534-582] 8.7E-9 - T[586-631] 3.1E-9 - T[635-680] 1.8E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 40.714 % | 97.1 | 1.73E-20 |
| AGRB2_HUMAN | 33.333 % | 87 | 2.01E-17 |
| AGRB3_HUMAN | 32.484 % | 82 | 7.0E-16 |
