- Transcript 'Phmamm.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S70.g02476.01.t
Possible name(s)
SOCS6; SOCS7
Gene model
Location
S70 [156,335 / 162,308]
Amino acid sequence
Length: 518
>Phmamm.CG.MTP2014.S70.g02476.01.p
MLVMQGKMALNGIKEDAPRPPLRKQFLPKKSDTKHSGLNGDTTSAYPSYRDAQVGLKNLT
VKADFVPTLNGAFVDEFGENVYGEIGKDNLFQNNSDPVVNGVENNDHISAESAKHEPEQA
AGSGLAKVETYQLRPKRRRHVYHEIVLPFEKSKVDDVQPSAPVHKLPPPALPFKPHYLRS
KFSGDFAPPLPPRVANKDALMQRKQLTEEYFENIRKSVDIDLLDDFIEDDFQQGPCPADA
LQQRSHLLNDAGAGPSRPNNNMNSDEPETQYWTIENDPNDSERRRSIPLLEIQTSRFSPE
IPASNSLFENNEPAKERTFPGLHTGTRVQFIQSLKCLKQCGWYWGNMTWEDAETMLSYKP
NAEGVFLVRDSQDPLHLLTLTVRSAENTIHHVRIEHADGKFQLYEPSGSVSQGAANCVRH
PNIVTFIKLVMKHSQSGTFIYFVKTRNMGEPPVQIRLMHPISRFSCVKSLKYYTRFVIKD
IVPAESIDLLPIPAKLKDYLQESQYFDPKEDFACAQVS
Nucleotide sequence
Length: 2,344
>Phmamm.CG.MTP2014.S70.g02476.01.t
GTACAAACAAAACATTGTGTATAATGAATGCTGGTAATGCAAGGCAAAATGGCACTGAAT
GGTATAAAAGAAGATGCACCAAGACCACCATTGCGAAAGCAGTTTTTACCGAAAAAAAGT
GACACAAAGCACAGCGGGCTTAATGGTGATACTACATCAGCTTATCCCAGTTACAGAGAC
GCTCAAGTCGGACTAAAAAACCTCACTGTAAAAGCTGATTTTGTTCCAACACTAAATGGG
GCTTTTGTTGATGAGTTTGGAGAAAATGTGTACGGTGAAATTGGGAAGGACAATTTGTTT
CAAAACAATTCCGACCCTGTAGTTAATGGTGTTGAAAATAACGATCACATAAGTGCTGAA
TCTGCAAAGCATGAACCCGAGCAAGCTGCAGGCAGTGGTTTAGCTAAGGTTGAAACTTAC
CAACTTCGACCAAAAAGACGCCGTCATGTCTATCATGAGATTGTTTTGCCCTTTGAAAAA
AGTAAAGTTGATGACGTTCAACCCTCTGCTCCCGTGCATAAACTTCCCCCTCCTGCGCTG
CCCTTTAAACCTCACTATTTGAGGTCTAAGTTTAGTGGGGATTTTGCCCCACCTCTGCCA
CCACGTGTAGCAAACAAGGACGCACTGATGCAAAGAAAACAATTAACCGAAGAGTATTTT
GAGAACATTCGCAAAAGCGTTGACATTGATTTGCTTGATGATTTTATAGAGGACGATTTT
CAGCAGGGACCATGTCCAGCTGATGCGTTGCAGCAACGATCACATCTTCTCAATGACGCT
GGTGCTGGCCCTTCAAGGCCCAACAACAATATGAACTCAGATGAACCGGAAACCCAATAT
TGGACAATTGAAAATGATCCAAATGATTCTGAGCGACGTAGGTCAATTCCACTGTTGGAA
ATTCAAACCAGCAGATTTTCACCCGAGATTCCTGCTAGCAACAGTTTGTTTGAAAACAAT
GAACCTGCAAAAGAGAGAACTTTTCCTGGCTTACACACAGGCACTAGAGTTCAGTTTATC
CAAAGTTTAAAATGCTTGAAACAATGTGGTTGGTACTGGGGTAATATGACGTGGGAAGAT
GCTGAAACAATGCTCAGCTACAAACCAAATGCTGAAGGAGTATTTCTTGTGCGTGACAGT
CAAGACCCATTGCATCTTCTCACACTAACTGTTCGATCGGCTGAAAATACAATTCATCAT
GTGAGGATCGAGCATGCAGACGGCAAGTTCCAGTTATATGAGCCAAGTGGTTCAGTAAGC
CAAGGAGCAGCAAACTGTGTCCGACATCCAAACATTGTAACTTTCATCAAACTCGTTATG
AAGCATTCTCAGTCTGGAACTTTTATTTATTTTGTCAAGACGCGCAACATGGGCGAACCT
CCAGTACAAATAAGATTGATGCATCCGATATCAAGGTTTTCTTGTGTGAAGAGTTTAAAG
TATTACACTCGCTTTGTCATAAAAGACATCGTTCCAGCTGAGTCAATAGACCTTTTACCG
ATTCCTGCAAAGTTAAAAGATTACCTGCAAGAATCTCAATACTTTGATCCCAAAGAAGAT
TTTGCCTGTGCACAAGTTTCATAGTGATGTGGTTTGTTGTTCTTACACTGTAATGGCTGG
AAACTACAACAAAAAACAACTATTTCATATTCTATAAAAACATGTCTTAACCAATACTTA
CAGCAATTCTATAAAAACATTGGGTTATTGGCATGACCTGAAGCAGGGGTTGGCAACCCA
TGGCACGCATGAAAAGGTTGGCATGTGAGGTGATTTTTCACCGCACGCCAACCGATTTTC
GTGTTTATATTGAAGTAACAATTCACATGTTACACTGCTTGTTTATAGTTTTTATCGTGC
CATTGTCTCAAAATTCAGCCTTACATGCACAAAACACTCTGCTTTCTCTTTATTATTGGT
ATCTGCTGGCACGAACCACTATTATTTAGAAAAACGTTGGCCCACGAGGTCATTAACACA
TGGAAATAACAAGTTAATCGGCATGTGTCGCCTAAAAGGTTGCCGACCCCTGGCCTAAAG
CTGATGTATATTTGTAAAGTTGGGTTCAGAGCAAAAGTAACCAAGATAAGTGAGTTTATG
CCTTCAGTACTTTTGAAATAGCAAGTCTAGGTGTTACTAACTACAAGCAAGGTAAATATT
TTTCCCACTCTATTGTGAGTTCCTGCATTCCATTGCACCTTTTGCACACAAGGTGGAACA
TAGAAATGTTTCCACTTATGCTGCTCTTGCCTTAAACACTGTCGCTATTGTGTGTTGAAA
ACTACCGACTGTCATATATCTGTGGCAGAAAACATTATTTCTGCAACCTGTTATTTTTAG
GAAG
| PANTHER |
SOCS7 (IPR028423) - T[311-512] 2.4E-48 |
| Gene3D |
SH2_dom_sf (IPR036860) - T[326-510] 4.2E-39 |
| SUPERFAMILY |
SH2_dom_sf (IPR036860) - T[333-435] 8.48E-19 |
| SMART |
SH2 (IPR000980) - T[340-436] 1.2E-15 |
| Pfam |
SH2 (IPR000980) - T[342-401] 4.9E-8 |
| ProSiteProfiles |
SH2 (IPR000980) - T[342-461] 14.735 |
| ProSiteProfiles |
SOCS_box (IPR001496) - T[456-506] 12.667 |
| SMART |
SOCS_box (IPR001496) - T[461-504] 3.2E-6 - T[467-503] 5.7E-5 |
| SUPERFAMILY |
SOCS_box-like_dom_sf (IPR036036) - T[467-506] 5.89E-8 |
| Pfam |
SOCS_box (IPR001496) - T[467-501] 8.7E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SOCS6_HUMAN | 37.688 % | 129 | 4.77E-32 |
| SOCS7_HUMAN | 42.857 % | 158 | 3.08E-42 |
