Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Cisavi.CG.ENS81.R978...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S68.g02430.01.t

Possible name(s)

CLVS1; CLVS2; TTPAL

Gene model

Phmamm.CG.MTP2014.S68.g02430

Location

S68 [248,990 / 249,830]

Sequences

Amino acid sequence

Length: 279

>Phmamm.CG.MTP2014.S68.g02430.01.p
MSEKRYEFTLSPELLEKAVTELNEPRDNTERLKAIDELKANYKESKYGPLLSTEDGFLLR
FLRAKKFNQKKALTALHNYHEARQNNKEIFDKVNNPILLKEVWDCGIMVAVEGAGLDGSC
VVLERAGLIKKGMDIYALTAYGVLTMEKLLENEQHQICGLQTMEDLENFNISIITKVSPI
ALAKMNSIWQDAMPLRIKAMHMFHEGTIMDILMTLFKPFLKEKLVKRIHMHGNSFEKVQN
MVDTTKLPPCFGGTGPSIDTIASEWNEKMKMAWSEDTYL

Nucleotide sequence

Length: 840

>Phmamm.CG.MTP2014.S68.g02430.01.t
ATGTCTGAAAAACGATATGAATTCACTTTAAGCCCTGAGCTTCTAGAAAAGGCTGTTACG
GAGCTGAATGAGCCTAGAGACAATACTGAACGGCTTAAAGCTATTGATGAACTAAAAGCT
AACTATAAAGAATCGAAATATGGCCCACTACTAAGTACTGAAGATGGCTTTCTACTGCGA
TTTTTAAGAGCCAAGAAGTTTAACCAGAAAAAAGCCTTAACTGCGCTGCACAACTATCAC
GAAGCAAGACAAAACAACAAAGAGATTTTTGATAAGGTAAACAACCCAATTTTGCTGAAA
GAAGTGTGGGACTGTGGTATCATGGTTGCCGTTGAAGGTGCTGGCTTGGATGGGTCTTGT
GTTGTCTTAGAACGAGCCGGTCTTATTAAGAAAGGCATGGATATCTATGCTTTGACAGCT
TACGGAGTTCTGACAATGGAAAAGCTTCTTGAAAATGAGCAACATCAAATATGTGGGCTT
CAAACCATGGAAGACTTGGAAAATTTCAACATAAGTATTATCACTAAAGTTTCGCCGATT
GCTTTGGCAAAAATGAACTCTATTTGGCAAGATGCAATGCCTCTTCGCATCAAGGCAATG
CACATGTTTCACGAAGGCACTATCATGGATATACTGATGACTCTGTTCAAGCCATTTTTA
AAAGAAAAACTTGTAAAGAGAATTCATATGCATGGCAACAGCTTTGAAAAGGTCCAGAAC
ATGGTGGACACAACAAAATTGCCCCCATGTTTTGGTGGCACTGGTCCTTCAATCGACACT
ATAGCCTCGGAGTGGAATGAAAAAATGAAAATGGCATGGTCAGAGGATACATATTTGTAA

InterProScan

SUPERFAMILY
CRAL/TRIO_N_dom_sf (IPR036273) - T[3-87] 4.32E-14
Pfam
CRAL/TRIO_N_dom (IPR011074) - T[34-78] 1.7E-7
SMART
CRAL/TRIO_N_dom (IPR011074) - T[54-79] 2.0E-7
Gene3D
CRAL-TRIO_dom_sf (IPR036865) - T[87-264] 2.2E-41
SMART
CRAL-TRIO_dom (IPR001251) - T[95-256] 2.3E-18
ProSiteProfiles
CRAL-TRIO_dom (IPR001251) - T[95-259] 11.416
SUPERFAMILY
CRAL-TRIO_dom_sf (IPR036865) - T[100-270] 4.58E-32
CDD
CRAL-TRIO_dom (IPR001251) - T[106-254] 2.75154E-23
Pfam
CRAL-TRIO_dom (IPR001251) - T[109-254] 4.3E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TTPAL_HUMAN 33.213 % 134 3.29E-37
CLVS1_HUMAN 31.89 % 117 6.82E-31
CLVS2_HUMAN 31.923 % 116 1.33E-30