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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S6...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S68.g02429.01.t

Possible name(s)

CLVS2; RLBP1; TTPAL

Gene model

Phmamm.CG.MTP2014.S68.g02429

Location

S68 [246,362 / 247,199]

Sequences

Amino acid sequence

Length: 278

>Phmamm.CG.MTP2014.S68.g02429.01.p
MSERYKCTLSPELLEKAVTELNEPRDNAERLKAIDELKANYKESKYGPLVNSSDGFLLRF
LRAKKFDQKKALNALHNYHDTRNNFKEVFDKVNNPVLLKDVWNCGVMVAIEGAGKDGSCV
VLERAGKIQRGMDVYDLTAYGVLMMEKLLENEQNQICGMQSVDDLADFNISILTKVSPVA
LSRMNAIWQDAMPLRIKAMHMFNEGTFMDVLMGLLRLMLKEKLMKRIHLYGKDPSKMTDF
IDPTKLPPSFGGTGPPVDEIIETWNERMSEAWSEDTHL

Nucleotide sequence

Length: 837

>Phmamm.CG.MTP2014.S68.g02429.01.t
ATGTCTGAAAGGTACAAATGTACTCTAAGTCCTGAGCTTTTGGAGAAAGCAGTCACTGAG
TTGAATGAACCAAGAGACAACGCTGAGCGGTTAAAAGCCATTGATGAACTAAAAGCAAAT
TATAAAGAATCAAAATATGGACCATTAGTTAACAGCAGTGATGGTTTTCTCCTACGTTTC
CTAAGAGCTAAAAAATTTGACCAGAAAAAGGCCTTAAATGCACTGCACAACTATCATGAC
ACCAGGAATAACTTTAAAGAGGTTTTTGACAAAGTGAATAACCCAGTTTTGTTAAAAGAT
GTGTGGAATTGTGGTGTTATGGTCGCCATTGAGGGTGCTGGCAAAGACGGGTCTTGCGTT
GTATTAGAACGTGCCGGAAAAATACAGCGAGGCATGGATGTCTACGATCTAACAGCCTAT
GGTGTATTAATGATGGAAAAACTGCTTGAAAATGAACAAAATCAGATATGTGGCATGCAA
AGTGTCGATGACTTAGCTGATTTCAACATAAGCATTCTCACAAAAGTTTCACCGGTAGCT
CTATCAAGAATGAATGCAATTTGGCAAGATGCTATGCCACTGCGTATTAAGGCAATGCAC
ATGTTTAACGAAGGCACTTTCATGGACGTACTAATGGGTTTACTGAGGCTTATGCTAAAG
GAGAAATTAATGAAGAGAATCCATTTGTATGGCAAAGACCCATCAAAGATGACAGATTTT
ATTGACCCAACCAAGTTACCCCCTTCGTTTGGGGGTACTGGACCCCCGGTTGATGAAATT
ATTGAAACTTGGAATGAACGAATGTCTGAAGCATGGTCTGAGGACACCCATTTGTGA

InterProScan

SUPERFAMILY
CRAL/TRIO_N_dom_sf (IPR036273) - T[3-86] 5.49E-14
Pfam
CRAL/TRIO_N_dom (IPR011074) - T[34-76] 2.0E-6
SMART
CRAL/TRIO_N_dom (IPR011074) - T[53-78] 6.9E-8
Gene3D
CRAL-TRIO_dom_sf (IPR036865) - T[85-263] 2.7E-40
SMART
CRAL-TRIO_dom (IPR001251) - T[94-255] 6.2E-14
ProSiteProfiles
CRAL-TRIO_dom (IPR001251) - T[98-258] 11.528
SUPERFAMILY
CRAL-TRIO_dom_sf (IPR036865) - T[99-268] 1.26E-33
Pfam
CRAL-TRIO_dom (IPR001251) - T[105-253] 4.9E-19
CDD
CRAL-TRIO_dom (IPR001251) - T[112-253] 1.48512E-23

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TTPAL_HUMAN 31.679 % 130 5.49E-36
RLBP1_HUMAN 31.179 % 107 3.04E-27
CLVS2_HUMAN 30.682 % 109 6.0E-28