- Molecular Tool 'ciad32g16-MO (Hamada's MO)' >
- Molecular Tool 'ciad13k19-MO (Hamada's MO)' >
- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S66.g02362.01.t
Possible name(s)
USP11; USP19; USP4
Gene model
Location
S66 [139,342 / 146,883]
Amino acid sequence
Length: 1,034
>Phmamm.CG.MTP2014.S66.g02362.01.p
MNDNTDNDAEVLEDVGSCSSLQVATCEPENQCFIPQDIPACHPQPGNCGLYNLGNTCYMN
STLQCLLHNTSLLEYFLSNKKYSPGVLMEFHSLIEKYWCGKWSVIVPKTFKDFISLTHPQ
FSGSSQHDGQEFLALFLGSLHLDLKEFDENHSTTVPLNTKICNDLTIPDDNSKRRRTESI
EYLDNCLPIYKRTDAINQPDLRSLTSFIGKEKKTLNVNVLNADVECDEEITTDHSNKYPQ
PIGSRLNNGQLLQLSSSDDQTSCSYDDTEMEQDLKSEKVADKRSKQTNVLADLKRQGKTN
TDVVQCKKLFSEADVDMLQLKTKVGTQSVLAYNVATEMSSLCKPYLSTEFPFDNFNFPDK
ACIEKSDYLGPLLPNSTALDIPNVSETFLSQVETGDGTSCFQNPEKKKIFSLKPHNRLRI
GLLQSKYSPLLPFSAKCKDCELGISSNNFCIHTPVEQNNGLESMTGEKGSLVTKFTNILV
DENPKPDQVKAGNLDNNAGCSKMHVEKSTNNARYDSLSKKANETEVSNEDIDLPGNLTRA
EEMWEKYSEKNHSIVVDNFQGQLESVVSCCKCGNTSVTYEPFMYLSVPIPHALQSVFDVR
LVPLHGDSFMTSVYALKQGRVEDLKEAIAQDLQSSHHKTFDLGKFRFCEMKNYNIFRVLE
NTAFLKSVNPTRRIEAIETADMLVAETETDDTTPTSSWNSCCICLEDFADSELLRHNAES
CSVMICHACVQSSVEHYGIDGFSCPICHCKCSPHTDFVQLASTSSSREVIVTLNFTCVDA
DGNLRPVAHPLLLRTSTNLKKSSLTEMNDNRLPKTENFILTYCSLDGMLCTRCSHLDSCK
GCEITDTDVLTLLPGDNICVRYIDLPKNFLSDCSKLESNERKPVTLDMCLQAFTKNETLD
DNNPWFCVSCGVHQIAEKQLRICKWPRTLILYIKRFLYHSKTAVKVDDEVLFPIESFNPG
MLSGTEPAQHKVYDLSACISHYGGVHSGHYTANCKHATTGQWHLYNDDVVSEHELSAKDT
SNVYVLFYQHREEA
Nucleotide sequence
Length: 3,105
>Phmamm.CG.MTP2014.S66.g02362.01.t
ATGAATGACAATACTGATAATGACGCTGAAGTACTTGAAGATGTTGGTTCTTGTAGCAGT
TTACAAGTAGCGACATGTGAACCTGAAAATCAGTGTTTTATTCCACAAGACATCCCAGCT
TGTCACCCACAACCTGGAAATTGTGGTCTGTATAATCTTGGCAACACCTGTTACATGAAC
AGCACGCTACAATGTTTGTTGCACAACACATCACTGCTGGAATACTTTTTGTCAAATAAA
AAGTATAGTCCCGGTGTTCTTATGGAGTTTCACTCATTGATTGAAAAATATTGGTGTGGA
AAATGGTCTGTCATAGTTCCAAAAACATTTAAAGATTTTATTAGTTTGACACATCCTCAA
TTTTCTGGCAGTTCGCAGCATGATGGGCAGGAGTTTTTGGCACTTTTTCTGGGTTCTTTG
CATCTTGATTTGAAGGAGTTTGATGAAAACCATTCCACTACAGTACCACTTAACACTAAA
ATCTGCAATGACCTAACCATTCCTGATGATAATTCCAAACGAAGAAGAACTGAAAGCATT
GAATATTTGGACAACTGTTTGCCGATTTACAAAAGAACTGATGCTATTAATCAGCCTGAC
CTACGTAGTTTGACTTCATTTATAGGCAAAGAAAAGAAAACACTGAATGTGAATGTGTTG
AATGCGGATGTGGAATGTGATGAGGAGATCACGACTGACCACAGCAACAAATACCCACAA
CCTATTGGTTCTCGGCTAAATAATGGACAACTGCTGCAACTTTCCAGTAGTGATGATCAA
ACTTCCTGTTCTTATGATGATACTGAAATGGAACAAGACCTAAAATCAGAAAAAGTTGCG
GACAAAAGATCTAAACAAACTAATGTTTTAGCTGACCTAAAACGCCAAGGAAAAACAAAC
ACTGATGTGGTACAATGTAAAAAGCTCTTCAGTGAAGCTGATGTTGATATGTTGCAACTA
AAAACCAAAGTTGGCACTCAAAGTGTTTTAGCATACAATGTTGCAACTGAAATGTCTTCA
CTATGCAAACCATATCTTTCAACTGAATTTCCATTTGACAATTTTAATTTCCCTGACAAA
GCTTGTATAGAAAAAAGTGATTATTTGGGGCCATTGCTGCCCAACTCTACAGCTCTGGAT
ATACCAAATGTTAGTGAAACGTTTCTATCACAAGTGGAAACAGGCGATGGGACTTCTTGT
TTTCAAAATCCTGAGAAAAAAAAGATATTTTCACTTAAACCGCACAACAGACTTCGCATA
GGGTTGCTACAATCCAAATATAGTCCACTGCTGCCATTTTCTGCCAAATGCAAAGACTGT
GAGTTGGGCATTTCATCAAATAACTTCTGTATTCATACCCCAGTTGAGCAGAACAATGGG
CTTGAATCTATGACAGGGGAAAAAGGATCCCTTGTCACTAAATTTACTAACATACTTGTG
GATGAAAACCCCAAACCTGATCAAGTGAAAGCAGGAAATCTTGACAACAATGCAGGATGC
AGTAAAATGCATGTTGAAAAAAGCACTAATAATGCAAGGTATGATTCACTCTCTAAAAAA
GCAAATGAAACTGAGGTTAGCAATGAGGACATTGATTTGCCTGGTAACTTGACAAGGGCC
GAGGAAATGTGGGAAAAGTACAGTGAAAAGAACCACTCTATTGTGGTGGACAACTTCCAA
GGTCAACTAGAGAGTGTTGTTTCGTGTTGTAAGTGTGGAAACACATCTGTGACATATGAA
CCATTTATGTATCTGTCCGTGCCAATACCACATGCACTACAATCTGTGTTTGACGTGAGA
CTTGTTCCTTTGCATGGGGATTCATTTATGACTTCTGTGTATGCACTGAAGCAGGGTAGA
GTAGAAGACTTAAAGGAAGCCATTGCACAGGATTTGCAATCTAGTCACCACAAAACATTT
GACCTGGGAAAATTTAGATTTTGTGAAATGAAGAACTACAACATCTTTAGAGTACTGGAG
AATACTGCATTCTTGAAAAGTGTTAATCCTACACGAAGAATAGAAGCAATTGAAACTGCT
GACATGCTTGTAGCTGAAACTGAGACTGATGATACAACACCAACCAGTTCTTGGAACAGT
TGTTGCATTTGTTTGGAAGATTTTGCTGATTCAGAGTTACTTCGACATAATGCTGAGTCA
TGTTCGGTGATGATCTGTCATGCTTGTGTCCAGTCATCAGTCGAACATTATGGAATAGAT
GGCTTTTCATGTCCAATTTGTCATTGCAAATGTTCGCCACATACTGACTTTGTTCAACTG
GCATCAACATCTTCCAGCAGGGAGGTGATTGTAACTTTGAACTTTACTTGTGTTGATGCT
GATGGAAATTTGCGGCCGGTTGCACATCCTCTTCTTTTAAGAACTTCAACTAACCTTAAG
AAATCCAGCTTGACTGAGATGAATGACAATAGATTGCCAAAAACCGAAAACTTCATCCTG
ACATATTGTTCACTCGATGGGATGTTGTGTACACGATGTTCACACCTCGATTCATGCAAA
GGTTGTGAAATTACAGACACAGATGTCCTAACATTACTGCCTGGTGACAACATCTGTGTC
AGGTATATCGACCTACCAAAGAACTTTTTGAGCGACTGCAGCAAATTGGAGTCAAATGAA
AGAAAACCTGTCACACTTGACATGTGCTTGCAAGCTTTCACCAAAAACGAAACATTAGAC
GACAACAATCCTTGGTTTTGCGTGTCCTGTGGAGTGCATCAGATTGCTGAAAAACAACTG
CGTATTTGCAAGTGGCCGAGGACGCTGATTTTGTACATCAAGCGTTTTCTCTATCACAGT
AAAACGGCGGTAAAAGTTGACGACGAGGTTTTGTTTCCTATCGAATCTTTTAATCCTGGC
ATGCTGAGTGGAACGGAGCCAGCGCAGCATAAAGTTTACGACCTTTCAGCTTGTATTTCA
CATTATGGAGGTGTTCACTCTGGTCATTACACAGCGAACTGCAAGCACGCCACAACTGGT
CAGTGGCATCTTTACAATGACGACGTAGTTTCTGAGCACGAACTCTCCGCTAAGGATACA
TCCAATGTCTACGTGCTATTCTACCAACACCGAGAGGAGGCTTAA
| PANTHER |
USP4 (IPR028134) - T[40-144] 5.2E-101 - T[516-751] 5.2E-101 - T[873-1033] 5.2E-101 |
| Pfam |
Peptidase_C19_UCH (IPR001394) - T[48-160] 1.1E-21 - T[529-1028] 4.3E-27 |
| ProSiteProfiles |
USP_dom (IPR028889) - T[48-1031] 43.265 |
| ProSitePatterns |
USP_CS (IPR018200) - T[49-64] . |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[701-748] 9.362 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| UBP11_HUMAN | 38.125 % | 114 | 8.05E-26 |
| UBP4_HUMAN | 36.97 % | 114 | 1.38E-25 |
| UBP19_HUMAN | 36.943 % | 99 | 6.8E-21 |