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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.216.v2....'
  2. Transcript 'KH2012:KH.C2.216.v1....'
  3. Transcript 'Phmamm.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S66.g02358.02.t

Possible name(s)

TNXB

Location

S66 [116,216 / 118,902]

Sequences

Amino acid sequence

Length: 557

>Phmamm.CG.MTP2014.S66.g02358.02.p
MELHYLSLFFFFAACGVVLGEGQRKCEPVCEAHQACVIKQGVGFCETHVDGLVDVLCQAL
SCVNGTCEKVMEVNEHGAYIHPVCDCEEGYVGLACDVKCPYCDASYQVCLLSQDNEAVCQ
VLPPEDWNCADGTCLNGGSCNNLTNANENTTLCNCAENYEGMTCGSLKKGGRQFVPEIII
DENVCQPNPCGGDCECKPSCKHELGYYCVSEDGYIGKNCDIAIPFVLCTENNIEIEVSSL
FYQEFDKEIGNSYIYVSPEADSTDRCIGGVDENVAVISKSGSFAAEFSLCKQEICDNSCP
SYLQVHNAAVYTVGQMIHFNVKIITKQDEIFPGAQFVTTLEKIFLSCSSDRFDMDSMLTM
MATAGCPSADQMFSFTMRSGATSTPQSVCGSIQVPRSTADNCQQIYIHAEILLCLTGDLQ
TCSSDNGNNFCTSAARKRRSAEENLAFAVIGPITIIPGSKGRKIEDLYLQGTTEGIVTFK
DDVILPDLVVKPNLKESPVMSTTANDIAYYSPVILIIGIVSFAISCITIVAFILVRLFRF
RHQPPPNKAMEMFPQTA

Nucleotide sequence

Length: 1,674

>Phmamm.CG.MTP2014.S66.g02358.02.t
ATGGAGCTCCATTACTTGAGTTTATTCTTTTTCTTTGCTGCTTGCGGAGTGGTTTTGGGA
GAAGGACAAAGGAAGTGCGAACCAGTGTGCGAAGCTCATCAGGCTTGTGTCATCAAACAA
GGAGTAGGCTTTTGCGAAACGCATGTGGATGGATTGGTAGATGTCCTTTGCCAAGCGCTG
TCGTGCGTGAATGGAACTTGTGAAAAAGTGATGGAAGTGAACGAACACGGAGCGTACATT
CACCCAGTTTGCGACTGTGAAGAAGGATATGTTGGGTTGGCCTGCGACGTAAAATGTCCG
TACTGTGATGCCAGTTACCAAGTTTGCTTGCTTTCACAGGACAATGAAGCAGTTTGCCAA
GTGCTTCCACCTGAGGACTGGAACTGCGCAGATGGTACTTGTTTAAATGGCGGATCTTGC
AATAACCTTACCAATGCCAACGAAAACACAACTTTATGCAATTGCGCTGAAAACTACGAA
GGAATGACATGTGGTTCGTTAAAGAAAGGTGGCAGACAGTTTGTTCCCGAAATAATTATT
GACGAGAACGTGTGTCAACCAAATCCATGTGGAGGTGATTGCGAATGCAAGCCTTCATGT
AAACACGAATTGGGTTACTATTGCGTAAGCGAAGATGGATACATTGGTAAAAATTGCGAC
ATCGCGATTCCGTTTGTTCTGTGCACGGAGAATAACATTGAAATAGAGGTGTCCTCGCTG
TTCTACCAAGAGTTCGACAAAGAAATTGGCAACAGCTATATTTACGTCTCACCTGAAGCG
GACAGCACAGACAGATGTATCGGTGGGGTCGACGAAAATGTTGCGGTAATTAGCAAGTCT
GGAAGTTTCGCAGCGGAATTCTCACTTTGTAAGCAAGAGATCTGCGACAACTCTTGCCCT
TCCTACTTGCAAGTTCACAACGCGGCTGTTTACACAGTCGGTCAAATGATCCACTTTAAC
GTCAAGATCATCACCAAACAGGACGAGATCTTTCCAGGGGCACAATTCGTTACGACGTTA
GAGAAAATATTCCTTTCTTGCAGCTCAGATAGATTTGACATGGACAGTATGTTAACCATG
ATGGCGACGGCTGGATGTCCGTCGGCTGATCAGATGTTTTCCTTCACGATGAGGTCAGGA
GCGACGTCAACTCCGCAATCGGTGTGTGGTTCAATTCAGGTTCCGCGAAGCACGGCAGAC
AATTGCCAACAAATTTATATCCATGCGGAGATTTTGTTGTGTCTAACTGGTGACCTGCAG
ACTTGCTCGAGCGACAATGGAAACAACTTTTGCACAAGTGCCGCTCGAAAACGTCGATCA
GCCGAAGAAAACCTCGCTTTTGCCGTGATCGGACCAATTACTATCATTCCCGGTTCCAAA
GGACGCAAGATCGAAGATCTGTATTTGCAGGGCACCACAGAAGGCATCGTTACATTTAAA
GATGACGTAATTTTGCCAGATCTTGTAGTAAAACCGAATCTTAAAGAATCGCCAGTAATG
TCAACAACAGCTAACGATATTGCATATTACTCCCCGGTTATACTTATCATCGGTATAGTA
TCCTTTGCGATTTCGTGCATCACAATAGTGGCATTCATCCTTGTCCGTCTATTCCGGTTC
CGCCACCAACCCCCTCCTAACAAAGCGATGGAGATGTTTCCGCAAACAGCATAG

InterProScan

SMART
EGF-like_dom (IPR000742) - T[56-96] 0.46 - T[128-165] 0.42
ProSiteProfiles
EGF-like_dom (IPR000742) - T[125-165] 13.551 - T[181-220] 7.025
ProSitePatterns
EGF-like_CS (IPR013032) - T[153-164] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value