- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S663.g11039.01.t
Possible name(s)
TIMP2; TIMP3; TIMP4
Gene model
Location
S663 [19,070 / 22,227]
Amino acid sequence
Length: 462
>Phmamm.CG.MTP2014.S663.g11039.01.p
MFMVDRTKNYDKMKFGILLAILLTVAVTSEACSCMPEHPQVLFCKAGFAIKAYIREKEDV
YVHGDGSIEVIPDENKKEKEQPREGDVESPEIEKDEPEVVTEEGEGDETRPAPVIDGVAV
ESQPLPEEPDNGLLLDEILTVNGGGPDAASSEVEDLNGEPVDVSPPEALEPEAEEPGTGN
EILGHSITTSSKAHSEALVDLKVEDKGEVATLVRPSLRETEVAAAYRPPAYIATYRGPEG
AMPGRNERFEGTGRAFALRSDDNGPPAYPRSSKVANERYKRGVVFPGDRTPGSHIPSGAT
GKGVRMTRYTVQVTRVLKGDITNGTAYVFTPPSSPMCRMDLNLRTRYLLLGKVRDSRLHI
NYCDYKIDLGMLGREQARNLVGNMKHRFKRGCGNCTVSVCRSGDCTSQIASPRHCLWRNI
YTVMSGKSSQFACIRLKTGRCGWYNAHNKNMTPEDLDIVESP
Nucleotide sequence
Length: 1,389
>Phmamm.CG.MTP2014.S663.g11039.01.t
ATGTTTATGGTAGACAGAACAAAAAACTACGACAAAATGAAATTTGGAATTTTACTTGCC
ATCTTGCTGACGGTTGCAGTTACGAGTGAAGCGTGCTCTTGTATGCCTGAACATCCACAA
GTGCTTTTCTGCAAAGCCGGTTTCGCTATAAAAGCCTATATTCGAGAAAAAGAAGACGTT
TACGTTCATGGTGACGGATCAATCGAAGTCATTCCCGATGAGAATAAGAAGGAAAAAGAA
CAACCACGGGAGGGCGATGTTGAGTCACCAGAGATAGAAAAAGATGAACCTGAAGTTGTA
ACAGAGGAGGGGGAAGGGGATGAAACTCGCCCTGCACCTGTTATAGACGGTGTAGCTGTG
GAAAGTCAACCTTTGCCGGAGGAACCAGATAATGGTTTGCTTTTGGACGAGATCCTTACA
GTAAATGGTGGAGGTCCTGACGCTGCTTCCTCGGAGGTGGAGGATCTCAATGGCGAACCG
GTGGATGTGTCTCCACCCGAGGCCTTGGAGCCAGAAGCGGAAGAGCCCGGAACTGGTAAT
GAGATTTTAGGACACTCGATCACAACGTCGTCAAAGGCACATAGTGAAGCATTGGTAGAT
CTCAAAGTGGAGGACAAAGGCGAAGTAGCGACTTTGGTTCGTCCATCATTGAGAGAAACC
GAAGTAGCCGCTGCCTACCGACCCCCAGCATACATCGCTACCTACAGAGGCCCAGAGGGG
GCGATGCCGGGACGAAACGAGCGATTTGAAGGCACGGGAAGAGCATTTGCACTTCGAAGT
GACGACAACGGACCACCAGCCTACCCTCGGTCCAGCAAAGTCGCCAACGAGCGATACAAA
AGAGGGGTTGTTTTTCCGGGAGACAGAACTCCAGGAAGTCACATTCCAAGTGGTGCAACG
GGAAAAGGAGTTAGAATGACACGATACACTGTTCAAGTTACACGGGTTCTCAAAGGAGAT
ATTACAAACGGAACCGCGTACGTTTTTACTCCACCAAGCAGTCCCATGTGCCGAATGGAT
CTGAACCTGAGGACGCGCTACCTTCTCCTTGGCAAAGTCAGAGATTCGCGACTTCATATT
AACTACTGCGATTACAAGATCGACCTGGGCATGTTGGGGAGAGAACAGGCGCGCAACTTG
GTGGGAAACATGAAACATCGATTCAAAAGGGGATGTGGAAACTGCACAGTTTCCGTTTGC
AGAAGTGGAGACTGTACATCACAGATCGCCAGCCCTCGCCATTGCCTGTGGCGCAACATC
TACACAGTCATGTCCGGAAAATCGAGTCAATTTGCTTGTATTCGGCTAAAGACTGGCAGA
TGCGGATGGTACAACGCACACAACAAAAACATGACTCCAGAAGACCTGGATATCGTCGAA
TCGCCTTGA
| PANTHER |
TIMP (IPR001820) - T[16-449] 1.2E-41 |
| Pfam |
TIMP (IPR001820) - T[30-64] 4.4E-7 - T[304-443] 2.7E-21 |
| ProSitePatterns |
TIMP_CS (IPR030490) - T[32-44] . |
| SUPERFAMILY |
TIMP-like_OB-fold (IPR008993) - T[32-446] 4.58E-32 |
| SMART |
TIMP (IPR001820) - T[283-443] 8.4E-11 |
| Gene3D |
TIMP_C (IPR027465) - T[372-450] 1.6E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TIMP2_HUMAN | 29.333 % | 78.2 | 1.39E-16 |