Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C1.1100.v1...' > 
  2. Transcript 'Cisavi.CG.ENS81.R1.4...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S661.g11023.04.t

Possible name(s)

Phmamm.CG.MTP2014.S661.g11023

Gene model

Phmamm.CG.MTP2014.S661.g11023

Location

S661 [70,149 / 82,592]

Sequences

Amino acid sequence

Length: 162

>Phmamm.CG.MTP2014.S661.g11023.04.p
PIERPQESEENSELERRHHHHHHHRHDDGASVENVPSDLDAEIAKLRRLDAIIGKVEEAA
MSSVALDVPLSSDDITELTRITAVDEPSLEEFRHVALPYKFRRYDLNNDGFVTPLELADS
TGTMLEDSEEPFNRADTNDDGLLTEEELHNAPWVFAMGQNAH

Nucleotide sequence

Length: 575

>Phmamm.CG.MTP2014.S661.g11023.04.t
CCCATCGAAAGACCGCAAGAAAGCGAAGAAAATTCTGAGCTTGAAAGACGGCATCACCAC
CACCATCACCATCGTCACGACGACGGCGCTTCTGTGGAAAATGTTCCGAGCGATTTAGAC
GCGGAGATTGCAAAATTAAGAAGATTGGATGCGATAATTGGAAAAGTGGAAGAGGCAGCA
ATGTCCAGCGTCGCATTGGATGTACCGCTTTCGTCCGATGACATTACGGAACTGACCCGG
ATAACTGCGGTAGATGAACCTTCGTTGGAAGAGTTTAGACATGTTGCTCTTCCCTACAAA
TTCCGACGATACGACTTAAACAACGATGGTTTTGTGACGCCGCTTGAACTAGCTGACTCC
ACGGGAACCATGTTAGAAGACAGCGAGGAACCGTTCAACCGCGCAGATACCAACGACGAT
GGACTTTTAACGGAGGAAGAACTACATAATGCGCCTTGGGTTTTTGCGATGGGCCAAAAC
GCTCACTGAGGTCATCCTGGAACGGACCAATCAAGGCTTCGCATCTGGTCAGCTGACCTA
CCTTCACACCAAATCGCTCTTTGTAAAGCGCAAGG

InterProScan

SUPERFAMILY
EF-hand-dom_pair (IPR011992) - T[92-150] 9.04E-10
ProSiteProfiles
EF_hand_dom (IPR002048) - T[101-127] 8.376 - T[132-158] 6.173
Pfam
EF_hand_dom (IPR002048) - T[101-117] 0.0021 - T[132-148] 0.013
ProSitePatterns
EF_Hand_1_Ca_BS (IPR018247) - T[105-117] . - T[136-148] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value