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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S661.g11023.01.t

Possible name(s)

Phmamm.CG.MTP2014.S661.g11023

Gene model

Phmamm.CG.MTP2014.S661.g11023

Location

S661 [70,070 / 82,954]

Sequences

Amino acid sequence

Length: 188

>Phmamm.CG.MTP2014.S661.g11023.01.p
WKNNFIMKLNVITLALALLIGVCRSSPIERPQESEENSELERRHHHHHHHRHDDGASVEN
VPSDLDAEIAKLRRLDAIIGKVEEAAMSSVALDVPLSSDDITELTRITAVDEPSLEEFRH
VALPYKFRRYDLNNDGFVTPLELADSTGTMLEDSEEPFNRADTNDDGLLTEEELHNAPWV
FAMGQNAH

Nucleotide sequence

Length: 1,016

>Phmamm.CG.MTP2014.S661.g11023.01.t
GTGGAAGAATAATTTTATAATGAAGCTCAATGTCATAACGCTTGCCTTGGCACTGCTGAT
CGGTGTCTGCCGGAGTTCACCCATCGAAAGACCGCAAGAAAGCGAAGAAAATTCTGAGCT
TGAAAGACGGCATCACCACCACCATCACCATCGTCACGACGACGGCGCTTCTGTGGAAAA
TGTTCCGAGCGATTTAGACGCGGAGATTGCAAAATTAAGAAGATTGGATGCGATAATTGG
AAAAGTGGAAGAGGCAGCAATGTCCAGCGTCGCATTGGATGTACCGCTTTCGTCCGATGA
CATTACGGAACTGACCCGGATAACTGCGGTAGATGAACCTTCGTTGGAAGAGTTTAGACA
TGTTGCTCTTCCCTACAAATTCCGACGATACGACTTAAACAACGATGGTTTTGTGACGCC
GCTTGAACTAGCTGACTCCACGGGAACCATGTTAGAAGACAGCGAGGAACCGTTCAACCG
CGCAGATACCAACGACGATGGACTTTTAACGGAGGAAGAACTACATAATGCGCCTTGGGT
TTTTGCGATGGGCCAAAACGCTCACTGAGGTCATCCTGGAACGGACCAATCAAGGCTTCG
CATCTGGTCAGCTGACCTACCTTCACACCAAATCGCTCTTTGTAAAGCGCAAGGTCGCCC
TCACGTGGAAATAAACTATTTTCATTTTTATGTCTATTTTTTGCGCTTTTAGCTGTTTAT
AGCCACCATGACGTCACTATTATGACGTTTTTTTGCGTTTTATGGTTCCTTTCTTAAGCC
CAACCTATTGTTTTACCTTTCTAATTTTCACAAGTGTTTTTCAGACTTGTCATAAAACGA
CGCCAATTTAAAATATGTTTGTAAGACCGTTGTCACATAGAGATATGTAATAGCAGTGTA
GCTGCACCGTTCGACACATAAATGTTACAAAGCTATTTCCGACTTGTTAGTAGAAGATTT
CGGTGCCATACATTTCCCATTCGTGGGTTTAAACAAACTAAGCAATAAAGACGAAA

InterProScan

SUPERFAMILY
EF-hand-dom_pair (IPR011992) - T[118-176] 1.25E-9
Pfam
EF_hand_dom (IPR002048) - T[127-143] 0.0026 - T[158-174] 0.016
ProSiteProfiles
EF_hand_dom (IPR002048) - T[127-153] 8.376 - T[158-184] 6.173
ProSitePatterns
EF_Hand_1_Ca_BS (IPR018247) - T[131-143] . - T[162-174] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value