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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA92YP09' > 
  2. Transcript 'Phmamm.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S660.g11014.01.t

Possible name(s)

EIF4A1; EIF4A2; EIF4A3

Gene model

Phmamm.CG.MTP2014.S660.g11014

Location

S660 [74,588 / 78,358]

Sequences

Amino acid sequence

Length: 404

>Phmamm.CG.MTP2014.S660.g11014.01.p
MAGRSTGRNVGKENDLSKVQFETSEGVDVIPTFDSMLLREDLLRGIYAYGFEKPSAIQQR
AISQIMKGRDVIAQAQSGTGKTATFSISVLQMIDTQLRDTQALILSPTRELAQQIQKVIL
ALGDYMAVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVFDMIRRRSLRTRSIKMLILD
ESDEMLNKGFKEQIYDVYRYLPPAIQVVLLSATLPHEILEMTNKFMTDPIRILVKRDELT
LEGIKQFFVAIEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVTSM
HGDMPQKERTELMKEFRSGSSRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGR
SGRYGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVAELI

Nucleotide sequence

Length: 1,215

>Phmamm.CG.MTP2014.S660.g11014.01.t
ATGGCTGGAAGAAGTACTGGTCGTAACGTTGGTAAAGAAAATGATTTGTCAAAAGTGCAG
TTTGAAACTTCAGAAGGAGTTGATGTCATCCCTACTTTTGACTCTATGTTATTGAGAGAG
GACCTGCTACGTGGAATTTATGCATATGGGTTTGAAAAGCCATCAGCCATTCAGCAGAGA
GCCATTTCTCAGATTATGAAAGGAAGGGATGTAATTGCACAAGCACAATCTGGAACAGGC
AAAACAGCCACTTTTTCCATCTCTGTGCTCCAAATGATCGACACCCAGCTTAGAGACACT
CAGGCCCTTATTTTGTCTCCTACGAGGGAATTGGCACAGCAAATTCAAAAGGTAATCCTT
GCCCTGGGCGATTACATGGCAGTGCAGTGTCATGCTTGCATTGGTGGAACTAATGTAGGG
GAAGATATAAGAAAGCTGGATTATGGGCAGCACATTGTTTCTGGAACTCCTGGACGAGTT
TTTGATATGATTCGGCGAAGAAGCTTGAGAACTCGCTCAATTAAAATGCTTATCCTGGAT
GAATCGGATGAGATGTTGAACAAAGGTTTCAAGGAACAGATTTATGATGTGTACAGATAC
CTGCCTCCAGCCATTCAGGTTGTGTTGCTGAGTGCCACCTTGCCACATGAAATTTTGGAA
ATGACAAACAAGTTTATGACAGACCCTATCAGAATTTTGGTAAAACGTGATGAACTGACA
CTGGAAGGCATCAAGCAATTTTTCGTTGCCATTGAGAAGGAGGAATGGAAGTTTGACACG
CTTTGTGACCTCTATGACACCCTCACTATTACACAAGCTGTGATCTTCTGTAACACCAAG
AGAAAGGTTGACTGGCTGACAGAGAAAATGAGAGAAGCCAACTTCACTGTGACATCAATG
CATGGTGACATGCCACAAAAGGAAAGAACTGAGCTCATGAAAGAATTCAGATCTGGTTCA
AGTCGTGTGCTGATATCAACTGATGTTTGGGCTCGTGGTCTTGACGTCCCTCAAGTGTCA
CTGATCATCAACTATGATCTTCCAAACAACAGAGAATTGTACATCCACAGAATTGGAAGA
TCTGGTCGCTATGGGCGCAAGGGTGTGGCAATCAACTTTGTGAAGAACGATGACATCAAG
ATTCTTCGTGACATTGAACAGTACTACTCCACACAGATCGATGAAATGCCCATGAACGTG
GCGGAATTGATCTGA

InterProScan

ProSiteProfiles
RNA_helicase_DEAD_Q_motif (IPR014014) - T[31-59] 9.626
SMART
Helicase_ATP-bd (IPR014001) - T[50-247] 3.0E-61
Pfam
DEAD/DEAH_box_helicase_dom (IPR011545) - T[56-218] 3.7E-43
ProSiteProfiles
Helicase_ATP-bd (IPR014001) - T[62-232] 30.755
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[99-387] 9.41E-75
ProSiteProfiles
Helicase_C (IPR001650) - T[243-404] 27.319
CDD
Helicase_C (IPR001650) - T[244-373] 1.25923E-45
Pfam
Helicase_C (IPR001650) - T[257-365] 2.9E-31
SMART
Helicase_C (IPR001650) - T[284-365] 1.7E-35

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
IF4A3_HUMAN 89.25 % 755 0
IF4A1_HUMAN 69.312 % 530 0
IF4A2_HUMAN 70.106 % 535 0