- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S64.g02284.02.t
Possible name(s)
CDC23; CDC27; TTC6
Gene model
Location
S64 [97,569 / 100,992]
Amino acid sequence
Length: 322
>Phmamm.CG.MTP2014.S64.g02284.02.p
MPGSNSIYVFVASDVFEELRTDHPHHVTGLALYSTTLWHLQDSIALSTLAHSLIELDPMS
TETWCSVGNCFSLRHDNESAVKFFCRAVQIDPQYAYAHTLLGHEYAYSDDNERAMACYRK
AIHCDPRHYNAWYGIGSIYYKQENFALAEIHFKKALSINMRSSVLLCHLGIVQHAQKRST
TALNTLANALSLEPRNALCKFHRASILFATDRHEEALKELLQLKLIVPKESLVYFLLGKV
YKVLGENHLAMMNFSWALDLDPKGINNHIKEAIDKQQAGEDGKMFDDGGETDNNEDSNNS
SGDLATAMVEDESTEHDSDESL
Nucleotide sequence
Length: 969
>Phmamm.CG.MTP2014.S64.g02284.02.t
ATGCCTGGCAGCAACAGCATATATGTGTTTGTGGCCTCCGACGTGTTTGAGGAACTTCGC
ACTGATCATCCACATCACGTGACCGGCCTCGCGCTCTATAGCACCACCTTGTGGCACTTG
CAGGACAGCATTGCTCTTTCGACGCTCGCCCACAGTCTCATCGAACTTGATCCCATGTCA
ACTGAGACATGGTGTTCTGTGGGGAACTGCTTCTCTCTTCGTCACGACAACGAAAGTGCT
GTGAAGTTTTTCTGTCGTGCTGTGCAAATTGACCCACAATACGCGTATGCTCACACCTTG
CTCGGCCACGAATACGCTTACAGCGATGACAACGAGCGAGCAATGGCTTGTTACCGAAAA
GCTATTCACTGCGACCCAAGGCATTACAACGCATGGTACGGCATTGGGTCAATTTATTAC
AAACAGGAAAATTTTGCCTTAGCTGAAATTCATTTCAAGAAAGCACTTTCAATTAACATG
AGAAGTTCGGTGCTGTTGTGTCATCTTGGAATCGTTCAACATGCACAGAAGCGATCAACG
ACGGCATTAAACACCCTTGCTAATGCGTTGTCCCTGGAACCTCGCAATGCGCTGTGTAAA
TTTCACCGTGCAAGTATTTTATTCGCCACCGACCGCCACGAGGAGGCGCTAAAAGAACTG
CTCCAATTGAAACTGATTGTGCCGAAAGAAAGCCTCGTCTATTTCCTACTAGGCAAGGTT
TACAAGGTTTTGGGTGAAAACCATCTCGCTATGATGAACTTCTCATGGGCGCTTGACCTC
GATCCAAAGGGAATCAACAATCATATTAAGGAGGCAATTGATAAACAACAGGCTGGTGAG
GACGGCAAAATGTTCGATGACGGTGGAGAAACTGACAACAACGAAGATTCCAACAACAGT
TCGGGGGACTTAGCGACCGCTATGGTTGAGGACGAATCAACAGAACATGACAGCGACGAG
AGTTTGTGA
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[26-158] 9.1E-49 - T[159-262] 1.3E-29 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[52-269] 1.35E-33 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[61-264] 39.678 |
| SMART |
TPR_repeat (IPR019734) - T[61-94] 0.0084 - T[95-128] 0.001 - T[129-162] 6.0E-4 - T[163-196] 3.2 - T[197-230] 220.0 - T[231-264] 0.65 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[61-94] 10.178 - T[95-128] 10.384 - T[129-162] 9.971 - T[163-196] 7.759 - T[231-264] 10.178 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDC23_HUMAN | 35.22 % | 105 | 2.89E-25 |
| CDC27_HUMAN | 57.586 % | 373 | 1.44E-123 |
