- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S64.g02284.01.t
Possible name(s)
CDC23; CDC27; TTC6
Gene model
Location
S64 [96,995 / 109,516]
Amino acid sequence
Length: 749
>Phmamm.CG.MTP2014.S64.g02284.01.p
MKFSNITTMLGDISVEFGDASCFALALLGKMYQRTERPEMAEKCFSMSLKLNPLLWTSFE
RMCEAGKKPNPEEHFHVEVQPTVINTQINTPQNVMPTRKKKGNAVKVLAPSQVGSNTEGT
EPFSNLSERIADPKTNISNVTPSAPVSTPPNSTDVNRGSDRGSKDSSTLDQTAMDFFRST
PSEQNEWDSSIDSYTGLRSAASDRRYIRTNLQGTKSLVGPAALSPLTPSFGVMPLIETPS
PAWERSKAMVTPTDMAPPPVDRKVPAKRMATRQSRKVGDAPTATSKLLFSSENSRANDPT
CESPNPESATAVTTTRRNTRSYVHSTSNSVKENAKKHVKGKSNQPKDVLKRNARFRQTKL
AGDIAVKDLSDEISKVESSCEKSSKPSSPQPYSTNQYVLAAHKTSIDGLMTLLRDMGNAL
LGGGGLARAYFEMTEYKKASDVFEELRTDHPHHVTGLALYSTTLWHLQDSIALSTLAHSL
IELDPMSTETWCSVGNCFSLRHDNESAVKFFCRAVQIDPQYAYAHTLLGHEYAYSDDNER
AMACYRKAIHCDPRHYNAWYGIGSIYYKQENFALAEIHFKKALSINMRSSVLLCHLGIVQ
HAQKRSTTALNTLANALSLEPRNALCKFHRASILFATDRHEEALKELLQLKLIVPKESLV
YFLLGKVYKVLGENHLAMMNFSWALDLDPKGINNHIKEAIDKQQAGEDGKMFDDGGETDN
NEDSNNSSGDLATAMVEDESTEHDSDESL
Nucleotide sequence
Length: 3,341
>Phmamm.CG.MTP2014.S64.g02284.01.t
GGAGAATTGACATTAATATGTTATGTATGTTTCAGTTTTCAGGAATTACAATTTATGACA
GACGCTTTGATTTTCGGAAATCATGATTGGCATTTAGGACTACTTCTTTCGTAAACGTAT
TTTGTTTTAGCATAGGGCAGGCAACAAAAATTTGCACCAGGGACTCGTTCTGCTTCAATT
TGGAAAACTATTCCGGATTTATGCATTCATTAAATAAAAAGTATGATGGTTATTCATGAT
GTATCCTGTCCTATAAAGTTGGATCCGACGACGCACTTTACCTTCTAGCCACTGCATATT
ATCGAATTGGAAAGCCCAAGATTGTTCAAGTTTTACTGGAAAAACATGGACTTCGGTTGC
CGGAGTGCAAACTTCTTTATGCTCAAGCTTGCTTTGACCAGTCTGAGTATGTGTTAAGGA
TTATACAACTGTAAAACTCTTCACAATAAGCAACAAATGTAAAAATACTAAATTTTACAG
ATATGTTAAGGCAGAACACACATTGACAAGCAGTGCAATGAAGTTCTCAAACATAACTAC
AATGCTTGGGGATATTTCAGTTGAGTTTGGTGATGCCAGTTGTTTTGCCTTGGCCCTCCT
GGGGAAAATGTATCAAAGGACCGAAAGGCCTGAAATGGCCGAAAAATGTTTTTCAATGAG
TTTAAAGCTAAATCCATTGCTTTGGACCTCATTTGAAAGAATGTGTGAAGCTGGAAAAAA
GCCTAATCCAGAGGAACACTTTCATGTGGAAGTACAACCCACTGTAATTAATACCCAAAT
CAATACACCCCAAAATGTTATGCCTACACGAAAAAAGAAGGGAAATGCTGTAAAGGTGCT
CGCCCCCAGTCAAGTTGGCTCCAACACTGAAGGGACAGAGCCATTTTCTAATCTTTCTGA
GAGAATTGCAGACCCGAAAACCAATATTTCTAATGTAACACCAAGTGCTCCTGTGTCGAC
ACCCCCCAATAGCACAGATGTTAATCGCGGCTCAGACCGCGGTAGTAAGGATTCATCCAC
ATTGGATCAAACTGCAATGGATTTTTTCAGATCTACACCATCAGAGCAAAATGAGTGGGA
CAGCTCAATTGACTCCTACACGGGACTTAGAAGTGCAGCAAGTGACCGACGTTATATTAG
AACAAACCTTCAGGGTACAAAATCCTTAGTAGGACCTGCTGCCTTAAGTCCACTCACACC
AAGCTTTGGTGTAATGCCTCTGATTGAAACCCCAAGTCCTGCATGGGAAAGATCAAAGGC
AATGGTAACACCAACTGACATGGCACCTCCTCCAGTTGACCGAAAAGTTCCTGCTAAAAG
GATGGCAACACGGCAATCTCGCAAAGTGGGTGACGCGCCAACTGCTACGAGCAAACTTCT
CTTCTCCTCTGAGAACAGCCGAGCCAACGACCCAACCTGTGAAAGTCCCAACCCCGAATC
TGCTACAGCAGTGACGACAACTAGAAGAAATACTCGCAGTTACGTTCACTCTACTTCGAA
CTCAGTTAAGGAAAACGCCAAGAAACATGTGAAAGGCAAATCGAATCAACCGAAAGATGT
CTTGAAGAGAAACGCGCGATTTCGGCAAACGAAATTAGCTGGCGATATAGCGGTGAAGGA
TTTATCTGACGAAATCAGCAAAGTGGAGTCTTCGTGCGAAAAATCGTCGAAACCAAGTTC
TCCGCAACCATACTCTACAAACCAATATGTGTTGGCGGCCCATAAAACATCTATAGATGG
CCTCATGACATTGCTTCGGGACATGGGAAATGCGTTACTCGGGGGGGGGGGTTTAGCAAG
GGCTTACTTTGAGATGACGGAATACAAAAAGGCCTCCGACGTGTTTGAGGAACTTCGCAC
TGATCATCCACATCACGTGACCGGCCTCGCGCTCTATAGCACCACCTTGTGGCACTTGCA
GGACAGCATTGCTCTTTCGACGCTCGCCCACAGTCTCATCGAACTTGATCCCATGTCAAC
TGAGACATGGTGTTCTGTGGGGAACTGCTTCTCTCTTCGTCACGACAACGAAAGTGCTGT
GAAGTTTTTCTGTCGTGCTGTGCAAATTGACCCACAATACGCGTATGCTCACACCTTGCT
CGGCCACGAATACGCTTACAGCGATGACAACGAGCGAGCAATGGCTTGTTACCGAAAAGC
TATTCACTGCGACCCAAGGCATTACAACGCATGGTACGGCATTGGGTCAATTTATTACAA
ACAGGAAAATTTTGCCTTAGCTGAAATTCATTTCAAGAAAGCACTTTCAATTAACATGAG
AAGTTCGGTGCTGTTGTGTCATCTTGGAATCGTTCAACATGCACAGAAGCGATCAACGAC
GGCATTAAACACCCTTGCTAATGCGTTGTCCCTGGAACCTCGCAATGCGCTGTGTAAATT
TCACCGTGCAAGTATTTTATTCGCCACCGACCGCCACGAGGAGGCGCTAAAAGAACTGCT
CCAATTGAAACTGATTGTGCCGAAAGAAAGCCTCGTCTATTTCCTACTAGGCAAGGTTTA
CAAGGTTTTGGGTGAAAACCATCTCGCTATGATGAACTTCTCATGGGCGCTTGACCTCGA
TCCAAAGGGAATCAACAATCATATTAAGGAGGCAATTGATAAACAACAGGCTGGTGAGGA
CGGCAAAATGTTCGATGACGGTGGAGAAACTGACAACAACGAAGATTCCAACAACAGTTC
GGGGGACTTAGCGACCGCTATGGTTGAGGACGAATCAACAGAACATGACAGCGACGAGAG
TTTGTGAATTCTACTCAGCAGTGATTCAGCATTACCTGTCTCCAGCCTTACGTCCCATGA
GCCCGACCTACACGTCCGTCAGTGGCAGTAAAACATCTTGACCTCCTGCATTTATCGTAT
TGTGTTGTCTACATATACGCGCGCATGTATGAAATAAAATTACAAGTGTGCGACAATTGT
TTTTACAACATTTTCTTGTTTTTGGAATCCAGGGCATCTGCTCCCATTAGTATCATCTCC
ACAACTTGAATTAATTGACTTAACGACAATGACTAATTTAATTGATCAACCAACGCAACA
TCATATAATCTGTTGTGCAATAAGGCAAACATAGAAAACAAACGTACACATTTAAAAAAA
ATCGCTCGCTTTAAATTATGAGCAAAACAAATACGAGACATAAAAAAGCTCTATGACTCC
TGTGGCGCGGATTGGGCGTTTTCTCGATTACGTTTTTCATGGAATTCACTGTGGCTAGAA
ACTTCGCTGATAGGAACCATACAACAACATTCGTCACATTTGTAACACGGCCCTGCGTTT
GCCACTGTCGAGTTCCAAATTGATTTCTTTACACTGGTGCT
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[5-78] 2.4E-13 - T[453-585] 4.4E-48 - T[586-689] 5.4E-29 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[22-55] 7.071 - T[420-691] 41.868 |
| SMART |
TPR_repeat (IPR019734) - T[22-55] 0.088 - T[488-521] 0.0084 - T[522-555] 0.001 - T[556-589] 6.0E-4 - T[590-623] 3.2 - T[624-657] 220.0 - T[658-691] 0.65 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[22-55] 7.641 - T[420-453] 6.166 - T[488-521] 10.178 - T[522-555] 10.384 - T[556-589] 9.971 - T[590-623] 7.759 - T[658-691] 10.178 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[425-511] 4.74E-5 - T[487-692] 1.52E-37 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDC23_HUMAN | 34.884 % | 110 | 4.85E-25 |
| CDC27_HUMAN | 40.026 % | 510 | 2.65E-170 |
