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  1. Transcript 'Phmamm.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S63.g02259.01.t

Possible name(s)

SLC6A1; SLC6A11; SLC6A13

Gene model

Phmamm.CG.MTP2014.S63.g02259

Location

S63 [145,313 / 148,858]

Sequences

Amino acid sequence

Length: 391

>Phmamm.CG.MTP2014.S63.g02259.01.p
MPGSGLVLEILNNPWNTNSCVTLELVRNTSLTTFLSTSNQSLAFAYSKESLSQVQFWRNY
VARIPNTSNALDGEFNWPMLCALIAAVTTVFFVNIRGIKTSGKVVYFTATFPYVSLIALL
IRGATLDGASMGIRAYLLPDLSQLAKAQAGPGLVFQVLPVALGLLPASQVWSALFFLMIY
FVAIDSAFAEFEGLVTILGDAVPGLISTPLRRVATNTVLGFVYFLVCSSQLSKQGIYIFE
LIFFYGASGISLIFIVLVETIAVGWLWDAAQFKRDVKQMTGSDLSRFFIYCYKYVTPLFL
LIFFIIKFEPLTVGDFVYPVWATVIGWGMALCSILCIPAVMIYVILKGKGTLRERFQRGL
RPIAVKKLPEDDEAKLKITEVLLEKRNTSVC

Nucleotide sequence

Length: 1,176

>Phmamm.CG.MTP2014.S63.g02259.01.t
ATGCCTGGTTCTGGTTTGGTTTTGGAAATCTTAAACAACCCTTGGAATACCAACTCATGC
GTAACACTTGAACTGGTCAGGAACACTTCGCTGACCACATTCCTGTCCACTTCTAACCAA
TCGCTGGCATTCGCTTATTCAAAGGAATCACTTTCTCAAGTTCAGTTTTGGAGGAATTAC
GTTGCGAGAATTCCCAACACTTCCAATGCTCTAGACGGGGAGTTTAATTGGCCAATGCTG
TGTGCTCTTATCGCTGCCGTTACTACAGTGTTCTTTGTTAATATTAGAGGAATCAAAACA
AGTGGAAAGGTCGTTTACTTCACTGCAACCTTCCCTTACGTCAGTTTGATCGCTCTGCTA
ATTAGAGGTGCCACACTGGATGGCGCAAGCATGGGAATTAGGGCTTATCTTCTTCCGGAT
TTGTCGCAGCTCGCGAAAGCACAGGCAGGACCCGGTCTTGTCTTTCAAGTTCTTCCAGTA
GCTTTGGGCCTTTTGCCTGCATCGCAAGTATGGTCTGCCCTCTTCTTTCTTATGATCTAC
TTCGTGGCAATCGACAGTGCGTTTGCCGAATTTGAGGGTCTTGTGACGATTTTGGGGGAC
GCTGTTCCGGGTCTGATTTCTACTCCCCTCCGAAGAGTGGCAACAAACACAGTGCTTGGC
TTTGTATATTTTCTTGTATGTTCTTCACAACTATCTAAGCAAGGAATCTATATTTTTGAG
TTGATCTTCTTCTACGGCGCATCAGGAATATCCTTGATTTTTATTGTTCTCGTCGAGACC
ATCGCGGTTGGCTGGTTGTGGGATGCTGCCCAATTCAAGCGTGATGTAAAACAAATGACC
GGAAGTGACCTTTCCCGATTCTTCATTTACTGCTACAAATACGTTACACCCCTTTTTCTT
TTGATTTTCTTTATCATCAAATTTGAACCGCTGACTGTAGGAGATTTTGTGTATCCGGTA
TGGGCGACTGTGATTGGTTGGGGTATGGCTTTGTGTTCAATTCTTTGTATTCCTGCTGTC
ATGATTTATGTCATATTGAAAGGAAAGGGCACACTAAGAGAGAGATTTCAAAGAGGTTTA
CGTCCCATCGCCGTCAAAAAACTTCCCGAAGACGACGAAGCAAAGTTGAAGATAACAGAA
GTTCTTTTAGAAAAAAGAAACACAAGTGTATGTTAG

InterProScan

PANTHER
Na/ntran_symport (IPR000175) - T[10-148] 1.6E-89 - T[149-359] 1.6E-89
SUPERFAMILY
SNS_sf (IPR037272) - T[11-346] 5.62E-61
ProSiteProfiles
Na/ntran_symport (IPR000175) - T[43-350] 29.862
Pfam
Na/ntran_symport (IPR000175) - T[147-346] 1.1E-43

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
S6A13_HUMAN 34.914 % 144 5.93E-38
S6A11_HUMAN 34.008 % 146 6.96E-39
SC6A1_HUMAN 34.914 % 153 2.05E-41