- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S629.g10723.01.t
Possible name(s)
ZNF227; ZNF234; ZNF454
Gene model
Location
S629 [52,948 / 54,437]
Amino acid sequence
Length: 299
>Phmamm.CG.MTP2014.S629.g10723.01.p
FVFSGKMSKIHMGMNMQEKQFECKTCGKRFQTSKYLRQHDSRMHDSSKKIHRCKVCGKGF
ITISELKQHLVSHYRTKPHRCNVCEKQYRTLQNLKLHALTHTGEKPYRCDICEKRYRTHR
HLELHLLAHSGEKPHRCNVCEKQYRTLQNLKLHALTHTGEKSYLCDICEKRYGTRGQLKI
HLLSHTGEKPYKCKCCDKRFMTSYSVTRHMVVHSNEKPHRCKFCEKSFTYLNNAKTHMKL
HTNKKTYICYVCDKLFNTARELKHHAVLHEDNIFFQCEICERRFRRPGYLKQHLAVHQD
Nucleotide sequence
Length: 1,489
>Phmamm.CG.MTP2014.S629.g10723.01.t
CTTTGTTTCGTAAAAAGTTTATTTAGGCGTAAACAAGCAGCATTTTAAACATCGAGCCAA
TAAATACTACAATCTACACAGGTGGGCCTGTAATGATTAACCTGCGAAAAGCACAGCATG
CATGCAAGAGCTACAATCAAGACGACATCGGAAAATAAGGCGTTTCTTGGACACAGGAAT
ATTTTTTCACAATTCCGAGCAAAAACAATTCTTTCATACATTTCTAAATCTTGCTATTCC
GAACAATTAAACCAATAGAAATCATCACTCATGTCTGGCCTTTACACTTTTTACATTGTA
AAGGCCGAATTGATTTATTTAAACACTTCAGTTTGGGAAACGGTATTCACCAGAAGATGT
CAAACGCATGCGTTATTGTTTATTGTCAACAGCCAAGTGTAGTTTCAAGTTATCGGCTCT
CCGAAATCTTTTTCCCCATCGGAAAAAATGGAGTCGCATGTAAATGCTGATTTAATTTTC
TCTTAAATTGGGGTCGCCTTTAGAAAAGGTTGAAAACCACTTCGTTAAGCCGTAAGGCAG
ATTGTTTAATTCAAGTACTCCAGTTTGCAATACAGTATTGCAATGACGTTAGTCTTGGTG
AACAGCCAAGTGCTGTTTTAAGTAACCGGGTCTCCGAAATCTTCTCTCACAAATCTCACA
CTGAAAAAATATATTGTCTTCATGTAAAACTGCATGATGTTTCAGTTCTCTTGCTGTATT
GAACAATTTGTCACAAACATAACATATATAGGTCTTCTTGTTGGTGTGAAGTTTCATGTG
TGTTTTTGCGTTGTTTAGGTACGTGAAACTTTTCTCACAAAACTTACATCTGTGAGGTTT
CTCATTGGAATGCACAACCATATGTCTTGTAACGCTGTAAGACGTCATAAACCTCTTATC
GCAGCATTTACATTTGTATGGTTTTTCACCAGTATGACTCAACAAATGTATTTTCAGCTG
CCCTCGAGTACCATAACGCTTTTCACAAATGTCACAGAGATACGATTTTTCACCAGTGTG
AGTTAGAGCATGTAATTTTAAATTTTGCAGAGTCCGATATTGCTTTTCACAGACATTGCA
CCGATGAGGTTTTTCTCCAGAATGAGCCAACAAATGTAGTTCCAAGTGCCTATGAGTACG
ATATCGCTTTTCACAAATGTCACAGCGATACGGTTTTTCTCCAGTGTGAGTTAGAGCATG
TAATTTCAAATTTTGCAAAGTGCGATATTGCTTTTCACAAACATTGCACCGATGAGGTTT
TGTTCTATAGTGACTGACCAAATGCTGTTTTAGCTCACTAATAGTTATAAAACCTTTTCC
ACAGACTTTACAACGATGGATTTTCTTGCTGCTGTCGTGCATTCTTGAATCATGCTGTCG
TAAATACTTGGATGTTTGAAACCTTTTGCCACAAGTTTTGCACTCAAACTGTTTTTCTTG
CATGTTCATACCCATGTGGATTTTTGACATCTTCCCAGAAAACACAAAA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[9-60] 4.22E-9 - T[47-97] 1.85E-13 - T[88-143] 1.04E-17 - T[144-200] 1.36E-18 - T[200-256] 2.94E-16 - T[245-297] 1.95E-11 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[21-49] 12.341 - T[51-78] 12.528 - T[79-106] 13.193 - T[107-134] 13.651 - T[135-162] 12.009 - T[163-190] 13.609 - T[191-218] 13.942 - T[219-246] 11.988 - T[247-269] 9.349 - T[275-299] 11.344 |
| SMART |
Znf_C2H2_type (IPR013087) - T[21-44] 0.16 - T[51-73] 0.0019 - T[79-101] 0.069 - T[107-129] 0.03 - T[135-157] 0.069 - T[163-185] 0.01 - T[191-213] 0.048 - T[219-241] 0.11 - T[247-269] 0.18 - T[275-297] 5.1E-4 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[23-44] . - T[53-73] . - T[81-101] . - T[109-129] . - T[137-157] . - T[165-185] . - T[193-213] . - T[221-241] . - T[249-269] . - T[277-297] . |
| Pfam |
Znf_C2H2_type (IPR013087) - T[51-73] 7.1E-4 - T[107-129] 0.011 - T[275-297] 7.8E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN234_HUMAN | 39.446 % | 209 | 9.32E-63 |
| ZN227_HUMAN | 39.792 % | 217 | 6.36E-65 |
| ZN454_HUMAN | 40.141 % | 208 | 1.37E-63 |
