- Transcript 'KH2012:KH.L41.79.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.L41.79.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S61.g02203.03.t
Possible name(s)
NPLOC4
Gene model
Location
S61 [123,650 / 127,828]
Amino acid sequence
Length: 555
>Phmamm.CG.MTP2014.S61.g02203.03.p
DGTKRIELSNNDTVATLFKRVEDIFQLKDSSWQLYQDRNKKGLLKNVRQKLKAAKLNHGD
MLYLVSSNGASSRPSSSQSQESQNVVEDPIDLQLWKEDGRIKQSKSAAGIFKIDDLPTEP
WDELYLKGKEIKFMSFHAYMRQQTAGVDKGKYFKLENFRAACKMSANGTKHSVVDLPSAV
TLNRQKYRHIDNIMFENRDIVDRFLNFWRVSGHQRMGYLYGRYTQHSEVPLGIKAEVCAI
YEPPQDSSVNSLQFHDDPMQIVVDEIATKLGLVKVGWIVTDLIAQDRSKGTVKNFRNSET
HFLTAEECITAAYLQNKHLNSCRLASNGKYGSKFTTVVVSGDKDYQISFEGYQVSNQGMS
LVADDCLIPTIDAPELGYVRESSPELFVADVYYKEKDDYGNEVTKLARPLPLEYLLLDVP
TAFSRESQFTCSNSISEFPACNRDAVGQVQSLSALSKYLSQFPADKFVDALSDFHVLVYL
ATNDTISLKDEMGILLDAVRNHDNNLATHWSQSASWSTLQELMRHSNEAIGHHHSDAHSM
DAEMREAIERSLQMQ
Nucleotide sequence
Length: 1,997
>Phmamm.CG.MTP2014.S61.g02203.03.t
GTGATGGAACAAAGCGAATCGAACTATCAAACAATGACACTGTTGCGACTCTGTTCAAAA
GAGTGGAGGATATTTTTCAGCTGAAAGATTCTTCCTGGCAGCTTTACCAAGATCGCAACA
AAAAAGGCCTTTTAAAAAATGTAAGACAAAAGTTAAAAGCAGCAAAATTGAACCATGGCG
ATATGCTCTATTTGGTTTCTTCAAATGGAGCCTCCTCTCGGCCCAGCTCTTCTCAGTCAC
AGGAGTCACAGAATGTGGTTGAAGACCCAATTGACTTACAATTATGGAAGGAGGATGGTC
GAATAAAACAAAGCAAAAGTGCTGCTGGAATTTTTAAGATTGATGACCTACCAACAGAGC
CCTGGGATGAACTTTACCTGAAGGGAAAAGAAATTAAATTTATGTCATTCCATGCATATA
TGAGGCAGCAAACGGCCGGGGTTGACAAAGGAAAGTATTTTAAACTAGAAAACTTCCGTG
CTGCCTGTAAAATGAGTGCAAATGGGACCAAGCACTCTGTGGTTGACCTTCCATCAGCAG
TGACGCTAAATCGGCAAAAATACCGACACATTGACAATATTATGTTTGAAAATCGGGATA
TAGTGGACAGGTTTCTCAATTTCTGGCGTGTATCAGGGCATCAAAGAATGGGCTACCTTT
ATGGTAGATATACACAACATTCAGAGGTTCCACTTGGCATAAAAGCAGAAGTATGTGCAA
TTTACGAGCCTCCTCAAGACAGTTCGGTAAACTCGTTGCAATTTCATGACGATCCGATGC
AAATTGTTGTGGATGAAATAGCTACCAAATTGGGTCTCGTAAAAGTTGGTTGGATCGTAA
CAGACTTAATAGCGCAGGACCGTAGCAAAGGAACTGTCAAGAATTTCCGGAACTCTGAAA
CACATTTCTTGACAGCCGAGGAATGCATAACAGCTGCTTATCTGCAAAACAAACATCTGA
ATTCTTGTAGACTGGCATCAAATGGAAAATATGGGTCAAAATTTACAACTGTTGTAGTTT
CGGGAGACAAAGACTATCAAATTTCATTCGAAGGCTACCAGGTTTCCAATCAGGGCATGT
CATTGGTTGCTGATGATTGTTTAATTCCAACGATCGATGCCCCTGAGTTGGGTTATGTAC
GAGAAAGCTCGCCAGAACTTTTTGTAGCTGATGTATATTACAAAGAAAAGGATGATTATG
GAAATGAAGTCACTAAATTGGCTCGACCTCTACCTCTTGAATATCTTCTACTGGATGTCC
CTACAGCATTTTCCAGAGAATCCCAGTTTACTTGCAGTAACAGTATTTCTGAATTTCCCG
CCTGCAATCGTGATGCTGTTGGCCAAGTACAGTCATTGTCAGCTCTTTCAAAATACCTCA
GTCAATTCCCTGCTGACAAATTTGTAGATGCATTGTCCGATTTTCATGTCTTAGTCTATT
TGGCTACTAATGACACTATTTCTCTAAAGGATGAGATGGGCATTCTTCTTGATGCTGTCC
GCAATCATGATAACAATTTAGCCACTCACTGGAGCCAATCTGCCAGTTGGTCTACACTAC
AAGAACTAATGAGGCATTCCAACGAGGCCATTGGTCATCACCATAGCGATGCACATAGTA
TGGATGCAGAGATGCGAGAAGCAATAGAAAGAAGCCTGCAAATGCAATGAGCCTGTATTT
TTCAGCATTTAATCATAAACAAGCAGCACAGGCTCTTGTGCAATGCTGTGAATTTTTGGT
ACTGTTTGAAATATGACTTCGAAGATGTCAAATGCACCAGAACTATTTCTACCTGCTTTG
CCACAAAAATTGAATTCAAATGTCTTCACACCTATTTAAAAAAAGCAAGGATCCTGAAAA
GTGCCAATTTCCAGTTGGTGTTCCAACAAAGTAATTTGCAGCCTAAAATGTTTATTCTAT
TTTTGTTCTTCACTTTAGCCGACTGTTTTTGATGTAGTACTTCATGTTATATTTGTCACT
CAAATTCTAGTTGCTCC
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[1-71] 5.61E-7 |
| Pfam |
Npl4_Ub-like_dom (IPR024682) - T[1-65] 7.8E-16 |
| PIRSF |
Npl4 (IPR016563) - T[1-527] 3.2E-144 |
| Pfam |
NPL4_Zn-bd_put (IPR007716) - T[85-212] 2.6E-26 |
| CDD |
NPL4_C (IPR007717) - T[181-480] 1.89886E-119 |
| ProSiteProfiles |
MPN (IPR037518) - T[193-330] 22.705 |
| Pfam |
NPL4_C (IPR007717) - T[215-523] 1.1E-106 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NPL4_HUMAN | 48.624 % | 530 | 0 |