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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S6188.g18978.01.t

Possible name(s)

COL21A1; COL6A5

Gene model

Phmamm.CG.MTP2014.S6188.g18978

Location

S6188 [245 / 2,501]

Sequences

Amino acid sequence

Length: 191

>Phmamm.CG.MTP2014.S6188.g18978.01.p
MPHLISGNTFTATAIERAVKIDFNYSANAATSKKFLILTTDGSATDVHLLDTSYGLTSSN
NITVYAIGIGPDVVQSELQTIANKGNSNDRVTLLTNFTTLGDTLIYIVTEIIANVSETTP
NVSEVTPNVSEMTPNVSEVTPNVSENTPNVSEMTPNVSEMTPNKSIPEDPSFLDQLRNLN
PASVKETENMS

Nucleotide sequence

Length: 576

>Phmamm.CG.MTP2014.S6188.g18978.01.t
ATGCCTCATCTTATTAGTGGAAACACTTTTACCGCAACCGCCATCGAGAGAGCTGTCAAA
ATCGACTTCAATTACTCTGCTAACGCAGCAACCTCCAAAAAATTTCTGATTCTTACAACG
GACGGTTCTGCAACGGACGTTCATCTTTTGGATACCAGCTACGGTTTGACGAGCAGCAAC
AACATTACAGTGTACGCCATTGGGATTGGACCAGACGTTGTTCAAAGTGAGCTTCAAACC
ATTGCCAACAAGGGAAATAGCAACGACAGAGTTACACTGTTAACCAATTTTACCACCCTT
GGTGACACCTTGATTTACATTGTAACTGAGATTATAGCAAATGTATCTGAGACGACACCA
AATGTGTCTGAGGTTACACCAAATGTATCAGAGATGACACCAAATGTGTCTGAGGTTACA
CCAAATGTGTCTGAGAATACACCAAATGTATCAGAGATGACACCAAATGTTTCTGAGATG
ACACCAAATAAATCTATACCCGAAGATCCTTCATTTCTGGATCAGTTGAGAAATTTAAAT
CCTGCAAGTGTGAAAGAAACAGAAAACATGAGTTGA

InterProScan

Gene3D
vWFA_dom_sf (IPR036465) - T[1-111] 7.4E-15
ProSiteProfiles
VWF_A (IPR002035) - T[1-111] 14.427
SUPERFAMILY
vWFA_dom_sf (IPR036465) - T[5-104] 1.28E-14
Pfam
VWF_A (IPR002035) - T[6-102] 5.4E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value