- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
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- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S615.g10586.01.t
Possible name(s)
BCL2L2-PABPN1; PABPN1; PABPN1L
Gene model
Location
S615 [56,691 / 63,011]
Amino acid sequence
Length: 226
>Phmamm.CG.MTP2014.S615.g10586.01.p
AEILDPDNSLDGLSSNAVYDGDLTGDGDGDDSALLDQSNATAEETDPELEAIKAKVKEME
AEAEKLKEMQNDVEKQITMSPPGSAALSFPTLEERVEADARSIYVGNVDYGATAEELEQH
FHGAGSVNRVTILCDKFSGHPKGFAYIEFADKESVETASALDGTLFRGRQLQVHAKRTNK
HGLTSTDRGRPRGRGRGHRGGRYHAPYYGRPRRAYRGRARSWYSPY
Nucleotide sequence
Length: 698
>Phmamm.CG.MTP2014.S615.g10586.01.t
GGCAGAAATCTTAGATCCTGACAACAGCTTAGATGGCCTTTCGTCCAATGCTGTATATGA
CGGTGACTTGACTGGTGATGGTGACGGTGATGATTCTGCCCTTCTTGATCAAAGCAATGC
AACAGCTGAAGAAACTGATCCAGAACTGGAAGCAATAAAAGCAAAAGTAAAAGAAATGGA
AGCTGAAGCAGAAAAATTAAAGGAAATGCAAAATGATGTAGAAAAACAAATTACTATGAG
TCCCCCTGGAAGTGCAGCTTTAAGTTTTCCGACTCTGGAGGAGCGTGTAGAAGCAGATGC
TCGGTCAATATATGTTGGAAATGTTGACTATGGAGCAACTGCAGAGGAATTGGAACAACA
TTTTCATGGTGCTGGATCAGTTAATCGAGTCACAATATTATGTGACAAATTCTCTGGGCA
TCCGAAGGGTTTTGCTTACATTGAATTTGCTGACAAGGAATCAGTAGAAACTGCATCAGC
ATTGGACGGGACACTGTTTCGTGGTCGTCAACTACAGGTGCACGCAAAGCGCACCAACAA
ACACGGATTGACATCGACGGACCGTGGGCGCCCTCGTGGACGGGGTAGAGGACACCGTGG
TGGGCGTTATCATGCACCGTATTACGGAAGACCACGTCGAGCTTACAGGGGAAGAGCAAG
GTCATGGTATTCGCCATATTGAAGAGATCTATTGAGTC
| PANTHER |
PABP2 (IPR034911) - T[38-226] 7.4E-94 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[93-207] 2.1E-25 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[96-203] 2.55E-28 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[101-178] 17.114 |
| SMART |
RRM_dom (IPR000504) - T[102-174] 4.3E-19 |
| Pfam |
RRM_dom (IPR000504) - T[103-171] 6.7E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PABP2_HUMAN | 68.586 % | 234 | 3.19E-77 |
| EPAB2_HUMAN | 51.415 % | 171 | 1.2E-52 |