- Transcript 'KH2012:KH.C4.439.v1....' >
- EST 'AHC0AAA225YP06_RM1' >
- Clone 'AHC0AAA220YG24' >
- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S606.g10507.01.t
Possible name(s)
FBN1; FBN2; FBN3
Gene model
Location
S606 [58,267 / 77,110]
Amino acid sequence
Length: 1,912
>Phmamm.CG.MTP2014.S606.g10507.01.p
MHTCGPDNPSEGEVIELTARCGTLLSPCFGVRNYPLEITEGLRLWYLNFAQPIAGLRLTA
NQFETNGINGILYIGRSVVMPTGIFGVASATKFCVADVDMCADTTFCTNPARGTCVRNGF
EEYSCNCMSTFTGARCETDVDECTPAPGACDPIAACTNSEGSFSCACPTGYNGNGIAASG
GCTDIDECSDAALNNCSTTGSNCTNLPGSFACSCLAGFNGDGTDCVDINECATNNGGCGD
TAMFTCTNEPAGSFTCGCLTGFINYPTCTNDNECSRNPCVANAGCTDNEGSFVCTCNAGY
TGDGLVSCNDINECMPISSCDVNAMCENTEGSFICRCLDGYTGFGLPDQCADVNECANTV
DNNCDPNANCTNAIPSFICTCRNGWSGDGVTCVDINECAETSDDCMMPAESCRNLMGSFE
CPCNEPEYRGTPGNCMGYFCAGNLTEDTVCNITGLIEWPTFFDGSMLYETNQDVTWFIDL
SAESGIDICTATAPCMNGGMCANEFVGYTCTCDANWTGRDCEIDVNECMDPNRCDPNATC
TNTAGSFDCTCNSVFSGDGMTCRPDIVISNLEALSEFNMTSGITSVTVTFQVTPEWNTLD
YIQNYVLTYTDSEGMSTMITTPFVNETNFNVITFDVTSFTNYTIELDPGENGTEISTATV
SFSAFSIEITTADSLPLVPTDLTAAGEAVQTTLTWTAPDETGRGITTGYQVGTMRSADSC
AAFGTIDQRECDSETMYTISTQNFATTMFVLTDLIPYREYSIRIRAETSAGFGNWSTPVI
QFTGYVCNSSSTETGVPICPHTSGALLSENFPRPYPGFTRAFWLLENPDRDIRFVFDIFD
TQFNQDYLDIGYGALPSPIATTDIRLQLTGPLGNTTAPIVRTSAETGGMVWARFESDIFT
ENRGFLMIYEQDIDSCSSSPCLMSGTCTDAVFDFTCTCPSLWSGKLCNIPLVTIDATCSS
SASDSITVMWTNNRANDSSLISMYTVTYTSTTTGRVTENFPIGTSQASFSGFSPFENVTV
TVEVVAVSPASQATTSTCEGQTQEAAPTAPTITAVTPATGPALDVTWSAPATLNGVLTQY
TVNYQTTNHATFGESMASGSMNVTAGLTTQLTGLQAFRMYQVTVTATTGGGTGPASAPVT
QTTPETAPTTGVSGVTVTVNTTHAVISYTAPTPVTGVFSYEVRYFVVGSISSQTVNSNNL
MQTIAGLTPGVDYTFEVTVSTTAGNGPLTSATATTDEDIAGLVTNTTFSPTINSITVNWV
EPVPPNGIITAYRVSWTPVTGTGGGTSDNLTGSTLSYTIEGLETYTEYTVTVFARTAVGE
NAGTVANQRTSEGVPRTGVSNIVFNPSATGVIVSYDAPSVVTGVFTFTLEYRIATESGLF
TASSSATEITGLSTFTTYTVRVNVSTGAGAGPSEERNFTTAQDIPGDVTNPSSSAVTTTS
ATVQWEAPSTPNGIITEYFISWAVNGVEMEVAVAASVTTYEITGLQPFTTYMVTIVAATI
AGNNTGSIVMFSTPGDVPDAPTLGPNINTDNSFNLTITPATPPRGDILYYEIRIRQNVSE
CTALGDSECYDVTQTLPASQTTFTTEVLPGFRSIIFSVRANTTAGFGPEATTTATTEIVA
AGTVTNVTLTPINSTAINVAWITARPVPGPSNYTITATDFANQTSTFTVMDSDGTALMFN
LTFAGLTQGSVYAVTVTQSTSVGSGSASPMVELTRPAAIFAGAQPNVSVTQNLLGASATQ
AFVMANPCNSVATFFTPNGGTIQAVDVIIRESGSSATTISYWAEASILNPTPQYFAATIP
CSSPSGRKKRRVSDDGQTFVNGHDQTCDPSLVTTVCNGPLASGRSYEVAFRADTGAPEGK
SGLTAFSAPVTTAVEAPPSGLTPGEIAAIVICSFIALLLIILLIYFCYRRRK
Nucleotide sequence
Length: 5,739
>Phmamm.CG.MTP2014.S606.g10507.01.t
ATGCACACTTGTGGACCTGACAACCCGTCTGAGGGCGAAGTAATCGAGCTGACTGCGAGA
TGTGGAACTTTGTTGTCCCCTTGCTTCGGTGTGCGAAATTATCCCTTGGAAATCACGGAA
GGACTTCGCCTTTGGTATCTTAATTTTGCACAACCGATAGCTGGTCTTCGTCTCACTGCT
AACCAATTTGAAACAAACGGCATCAATGGTATTCTTTACATTGGAAGATCTGTGGTAATG
CCCACAGGAATATTCGGAGTTGCGAGTGCTACGAAATTCTGTGTTGCAGATGTGGACATG
TGTGCTGATACTACTTTCTGCACCAACCCTGCTAGGGGTACTTGTGTTCGAAACGGATTT
GAAGAATATTCATGCAACTGTATGAGCACATTTACTGGCGCACGCTGCGAAACAGATGTC
GATGAATGTACTCCTGCACCTGGTGCATGTGATCCTATAGCAGCGTGCACAAACTCTGAA
GGATCATTTTCGTGTGCATGTCCTACTGGATACAATGGAAACGGAATTGCTGCATCGGGA
GGATGCACCGATATTGACGAATGCAGTGATGCAGCATTAAACAATTGCAGCACTACAGGT
TCAAACTGCACAAATTTGCCTGGAAGCTTCGCTTGCTCATGTTTAGCAGGTTTTAATGGC
GATGGAACTGACTGTGTTGATATCAACGAATGCGCAACAAATAACGGAGGATGCGGAGAT
ACGGCAATGTTTACATGCACAAACGAGCCAGCAGGAAGTTTCACTTGCGGATGTTTGACC
GGATTTATTAACTATCCTACATGCACCAACGACAACGAATGTTCAAGAAACCCCTGTGTT
GCAAATGCCGGTTGCACGGACAATGAAGGATCCTTTGTGTGCACGTGCAACGCTGGCTAT
ACTGGTGATGGCTTGGTGTCTTGCAACGATATCAATGAATGTATGCCCATATCTTCATGT
GATGTTAATGCAATGTGCGAGAACACAGAAGGCAGTTTTATCTGCAGATGTTTAGACGGA
TACACAGGATTTGGTTTACCCGATCAATGTGCAGACGTGAACGAATGTGCGAACACGGTG
GATAACAACTGTGATCCAAACGCCAATTGCACAAATGCTATTCCAAGCTTTATCTGCACG
TGTCGAAATGGTTGGTCAGGCGATGGAGTTACCTGTGTGGACATCAATGAATGTGCGGAA
ACTTCCGATGATTGTATGATGCCCGCAGAGTCTTGCAGAAACTTAATGGGAAGTTTTGAA
TGTCCTTGTAATGAGCCTGAGTACCGAGGAACGCCTGGCAATTGCATGGGTTACTTTTGT
GCTGGGAACTTGACGGAGGACACAGTTTGCAATATAACAGGCTTGATTGAATGGCCAACC
TTCTTCGACGGAAGCATGCTTTACGAGACAAACCAGGACGTGACATGGTTTATTGACCTT
TCGGCTGAAAGTGGCATAGATATTTGTACGGCAACCGCTCCTTGTATGAATGGAGGAATG
TGTGCAAATGAATTCGTTGGTTATACTTGCACATGTGACGCTAACTGGACAGGGCGTGAC
TGCGAAATAGATGTGAACGAATGCATGGATCCAAATCGTTGTGACCCAAACGCTACCTGT
ACTAACACCGCCGGTTCTTTTGATTGCACTTGCAACTCTGTTTTTAGTGGAGACGGAATG
ACTTGCAGACCTGACATCGTTATTTCCAATCTGGAAGCTTTGTCTGAGTTCAACATGACC
AGCGGCATAACTTCTGTCACTGTCACTTTCCAAGTTACCCCAGAGTGGAATACTCTGGAC
TACATTCAAAACTACGTTTTAACATACACTGACAGCGAAGGGATGAGTACCATGATCACC
ACACCTTTTGTCAATGAAACCAATTTTAATGTGATCACTTTTGATGTTACTTCATTTACT
AATTACACAATCGAGTTAGATCCAGGCGAAAATGGAACAGAGATTTCGACTGCAACTGTC
AGCTTTTCCGCTTTTTCTATAGAAATCACGACTGCCGATAGTCTGCCACTCGTCCCAACT
GATCTTACAGCAGCGGGCGAAGCAGTCCAAACCACACTTACATGGACAGCACCTGATGAA
ACTGGTCGTGGAATCACTACCGGGTACCAGGTCGGAACAATGCGATCGGCAGATAGTTGT
GCGGCATTCGGAACTATTGACCAACGTGAATGTGACTCAGAAACGATGTACACAATCAGC
ACACAAAACTTCGCTACCACTATGTTTGTTCTCACTGATCTAATTCCTTATCGTGAATAC
AGTATCCGTATCCGCGCAGAAACATCCGCCGGTTTTGGAAACTGGAGTACACCTGTGATA
CAGTTTACTGGTTATGTTTGCAACAGTTCAAGTACAGAAACTGGAGTACCGATTTGCCCA
CATACTTCTGGCGCTTTGCTTTCTGAAAACTTTCCAAGGCCGTACCCGGGTTTTACTCGC
GCTTTTTGGCTTTTAGAAAACCCTGATAGAGATATTCGCTTTGTCTTTGATATTTTCGAT
ACTCAATTCAATCAAGACTATTTGGACATTGGCTATGGAGCTTTGCCAAGCCCTATTGCA
ACAACTGACATACGACTACAGTTGACTGGACCGCTGGGAAACACAACTGCTCCAATCGTC
CGCACGAGCGCAGAAACTGGAGGAATGGTCTGGGCTCGTTTTGAAAGTGACATTTTCACG
GAAAATAGAGGCTTTTTAATGATTTACGAACAAGATATCGACTCTTGCTCGAGCAGCCCA
TGTCTTATGAGTGGAACATGTACAGACGCAGTATTTGATTTCACATGCACTTGTCCGTCT
TTGTGGAGTGGAAAATTGTGTAATATACCGCTTGTCACAATCGATGCCACTTGTTCGAGC
TCAGCAAGCGATAGCATCACTGTGATGTGGACAAACAACCGGGCCAATGACTCCAGTTTG
ATTTCTATGTACACAGTTACATACACATCGACCACCACTGGCAGAGTGACAGAGAATTTC
CCTATTGGCACAAGTCAAGCTTCGTTTTCGGGATTCAGTCCATTTGAAAATGTCACTGTC
ACTGTTGAAGTGGTTGCAGTTAGTCCAGCCTCTCAGGCAACCACGTCAACTTGCGAGGGT
CAAACACAGGAAGCAGCGCCAACTGCTCCAACTATAACAGCTGTGACGCCAGCAACAGGC
CCAGCTCTTGATGTCACGTGGTCTGCACCAGCGACGCTCAACGGAGTTTTGACACAGTAT
ACGGTTAACTATCAGACAACAAATCACGCTACTTTTGGGGAAAGTATGGCATCAGGCAGC
ATGAATGTTACAGCTGGATTAACAACCCAGCTCACAGGACTTCAAGCTTTCAGAATGTAC
CAAGTAACCGTCACAGCTACTACAGGAGGAGGAACAGGGCCTGCTAGCGCCCCTGTAACT
CAAACCACGCCTGAAACAGCTCCCACCACCGGTGTATCAGGAGTAACAGTAACGGTCAAC
ACCACCCATGCCGTCATCAGCTACACCGCACCAACCCCTGTCACTGGGGTCTTTTCGTAC
GAGGTTCGATACTTTGTTGTGGGCAGCATATCATCGCAAACTGTCAACAGCAATAATCTC
ATGCAAACTATCGCTGGATTAACACCTGGGGTTGATTACACGTTTGAGGTTACTGTGTCA
ACTACTGCTGGAAATGGTCCCCTAACTTCGGCTACTGCAACAACGGACGAAGACATAGCT
GGGCTTGTGACAAACACAACGTTTTCACCCACCATTAACTCAATCACAGTAAATTGGGTT
GAACCAGTTCCTCCTAATGGAATAATCACTGCTTACAGAGTTTCCTGGACACCAGTGACA
GGTACAGGTGGTGGTACGTCTGATAACTTAACAGGAAGCACCCTGTCGTACACCATTGAA
GGGTTAGAAACCTACACAGAATACACTGTTACTGTATTTGCCCGGACAGCTGTTGGGGAA
AACGCGGGAACTGTCGCCAATCAGCGAACCAGTGAAGGAGTTCCCCGCACTGGCGTAAGC
AATATTGTTTTCAACCCGAGTGCAACTGGGGTCATTGTAAGCTACGATGCACCTTCTGTT
GTGACTGGAGTCTTTACATTCACGTTGGAATATCGTATTGCCACAGAATCAGGTTTATTT
ACTGCAAGTTCAAGTGCCACCGAAATAACTGGCCTGAGTACTTTTACAACTTACACAGTT
AGGGTTAATGTAAGCACTGGTGCCGGTGCTGGACCAAGCGAAGAAAGGAATTTCACTACC
GCGCAAGACATTCCTGGCGATGTAACAAATCCTAGTAGTTCGGCAGTCACAACCACAAGT
GCTACTGTGCAATGGGAAGCGCCGTCAACTCCCAACGGCATCATAACAGAATACTTCATT
TCTTGGGCAGTAAATGGCGTTGAGATGGAAGTTGCAGTGGCCGCCTCCGTAACCACCTAC
GAAATCACGGGACTGCAGCCATTTACAACATACATGGTGACAATCGTAGCAGCCACGATC
GCAGGGAACAACACTGGTTCGATTGTGATGTTTTCAACACCAGGAGACGTACCTGATGCT
CCAACCCTCGGTCCGAATATCAACACTGACAATTCATTCAACTTAACGATTACACCTGCA
ACTCCACCAAGGGGCGACATACTTTACTATGAGATCCGTATAAGACAAAACGTTTCCGAA
TGTACTGCTCTCGGCGACAGCGAATGTTACGACGTAACGCAAACGTTACCAGCTTCTCAA
ACAACATTCACAACAGAAGTTCTGCCTGGGTTCAGATCTATTATATTTTCTGTGAGGGCT
AACACAACTGCAGGATTTGGACCTGAGGCCACAACGACGGCAACAACCGAAATTGTTGCG
GCCGGAACAGTTACAAATGTTACTCTTACTCCAATCAACTCCACCGCTATAAATGTGGCA
TGGATAACAGCTAGACCCGTTCCCGGTCCCAGCAACTACACCATCACTGCAACCGATTTT
GCGAATCAAACTAGCACGTTTACCGTGATGGATTCTGACGGCACGGCCCTAATGTTTAAC
CTCACGTTCGCTGGGCTCACTCAAGGGTCTGTTTACGCGGTGACTGTCACCCAGTCTACT
TCTGTTGGCAGTGGCTCTGCTTCACCCATGGTAGAGCTGACAAGACCCGCTGCAATTTTC
GCTGGAGCACAACCTAATGTTAGTGTTACTCAAAACCTTCTTGGTGCATCTGCTACTCAG
GCATTTGTCATGGCGAACCCATGCAACAGTGTGGCTACGTTTTTCACACCTAATGGCGGA
ACAATCCAGGCTGTTGATGTGATTATAAGAGAATCAGGCTCTTCGGCTACTACTATTAGC
TACTGGGCAGAAGCATCCATCCTGAACCCAACACCCCAATATTTTGCTGCTACGATTCCC
TGCAGTTCACCATCGGGAAGAAAGAAGAGGAGAGTATCTGATGACGGTCAAACATTTGTA
AACGGCCACGACCAAACCTGTGACCCATCGTTGGTCACAACTGTTTGCAATGGACCTCTT
GCATCCGGTCGATCGTACGAAGTTGCTTTTCGGGCTGACACCGGAGCTCCTGAGGGAAAA
TCTGGTTTGACCGCATTTTCGGCTCCAGTAACAACAGCAGTCGAGGCGCCGCCGAGTGGA
TTGACACCTGGCGAGATTGCTGCCATCGTGATTTGCAGTTTTATCGCTTTACTTCTTATC
ATACTGCTCATATACTTCTGCTACAGACGCAGAAAGTAA
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[93-234] 4.24E-8 - T[226-356] 2.82E-7 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[97-137] 14.643 - T[139-174] 11.959 - T[184-226] 12.547 - T[227-269] 6.784 - T[270-309] 16.455 - T[310-351] 14.756 - T[352-393] 14.66 - T[394-436] 6.913 - T[485-522] 17.564 - T[524-563] 13.066 - T[912-948] 18.05 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[97-137] 0.082 - T[139-183] 2.5E-6 - T[184-226] 3.2E-8 - T[227-269] 7.9E-5 - T[270-309] 9.8E-6 - T[310-351] 4.2E-8 - T[352-393] 3.8E-8 - T[394-436] 1.3E-4 - T[487-522] 0.0013 - T[524-563] 6.3E-6 - T[912-948] 4.0E-4 |
| SMART |
EGF-like_dom (IPR000742) - T[100-137] 0.018 - T[142-183] 11.0 - T[187-226] 0.15 - T[230-269] 6.0 - T[273-309] 0.0016 - T[313-351] 0.015 - T[355-393] 1.2E-5 - T[397-436] 13.0 - T[488-522] 3.5E-4 - T[527-563] 0.31 - T[915-948] 0.065 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[125-136] . - T[212-225] . - T[256-268] . - T[294-308] . - T[335-350] . - T[379-392] . - T[510-521] . - T[936-947] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[139-165] . - T[310-335] . - T[524-549] . |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[139-172] 5.3E-9 - T[184-225] 9.5E-7 - T[310-342] 6.4E-8 - T[394-425] 9.2E-6 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[156-167] . - T[203-214] . - T[285-296] . - T[326-337] . - T[370-381] . - T[412-423] . - T[501-512] . - T[540-551] . - T[927-938] . |
| Pfam |
EGF_dom (IPR024731) - T[359-392] 6.5E-8 - T[532-562] 4.4E-9 |
| Pfam |
EGF-like_dom (IPR000742) - T[489-519] 1.9E-4 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[567-674] 7.472 - T[675-789] 13.278 - T[950-1045] 11.211 - T[1046-1146] 20.568 - T[1148-1233] 7.764 - T[1235-1337] 18.785 - T[1338-1423] 9.626 - T[1427-1516] 19.771 - T[1517-1621] 11.511 - T[1623-1718] 11.259 |
| Gene3D |
Ig-like_fold (IPR013783) - T[661-787] 3.6E-15 - T[1032-1144] 1.0E-17 - T[1145-1238] 8.5E-9 - T[1249-1325] 4.6E-16 - T[1327-1416] 6.1E-7 - T[1417-1509] 1.1E-18 - T[1510-1617] 1.1E-8 - T[1618-1717] 6.3E-8 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[668-784] 5.28E-15 - T[954-1148] 1.26E-22 - T[1157-1331] 3.57E-24 - T[1339-1518] 3.3E-31 - T[1516-1716] 1.06E-14 |
| CDD |
FN3_dom (IPR003961) - T[676-783] 3.89328E-12 - T[1046-1143] 0.00243636 - T[1152-1235] 1.27369E-7 - T[1251-1320] 8.26733E-13 - T[1343-1420] 3.32033E-5 - T[1425-1502] 4.60735E-13 - T[1518-1608] 0.00307959 - T[1622-1714] 8.00566E-4 |
| SMART |
FN3_dom (IPR003961) - T[676-773] 1.1E-7 - T[950-1029] 59.0 - T[1047-1133] 2.9E-7 - T[1149-1226] 0.0026 - T[1240-1321] 6.1E-7 - T[1336-1411] 0.056 - T[1425-1504] 6.2E-11 - T[1518-1607] 4.6 - T[1621-1705] 4.9 |
| Pfam |
FN3_dom (IPR003961) - T[679-776] 1.8E-7 - T[1048-1136] 3.1E-11 - T[1153-1228] 4.3E-6 - T[1244-1320] 9.6E-13 - T[1428-1502] 2.9E-12 |
| ProSiteProfiles |
CUB_dom (IPR000859) - T[787-912] 11.132 |
| Gene3D |
Sperma_CUB_dom_sf (IPR035914) - T[796-909] 3.5E-8 |
| CDD |
CUB_dom (IPR000859) - T[802-910] 5.32379E-7 |
| SUPERFAMILY |
Sperma_CUB_dom_sf (IPR035914) - T[802-910] 6.54E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBN3_HUMAN | 33.533 % | 176 | 4.85E-44 |
| FBN1_HUMAN | 34.949 % | 177 | 2.88E-44 |
| FBN2_HUMAN | 34.842 % | 170 | 3.87E-42 |