- Transcript 'Phmamm.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S600.g10450.01.t
Possible name(s)
RREB1; ZKSCAN8; ZNF641
Gene model
Location
S600 [55,715 / 75,206]
Amino acid sequence
Length: 1,167
>Phmamm.CG.MTP2014.S600.g10450.01.p
MFQNLCVQQKHQLTEKDRRHFFMCKKCDVLFPTLFVLKFHLKHSHSTPNGNLSLPKLTIS
GKTYILNSERISFGVSIDTTSASTNPSSFLNGLMSRNFMQALQLKSVTESKDVSCANRPC
AYGVDDPSIRTSPLVAYLGVPQWLRNNNTQTNWCANESEASIRPPLKMKLLRCKSVPGID
EPTISSAESYSVNNKDLANRTKTNDGCACMICGEQFATSGAVDAHRAGTTCGIGVRTSSN
GRKLFWCRLCDYASFEKSTILRHQRTHTGIRPYSCKFCSLAFTTKANCERHIRKRHQGDV
DTEMDVKSSVLCDQDLLKQARSGGEAVPTQQNITPSRERLFRFRCRMCRAMFSSRSNGAR
HVMDKHGVFSRKGANEMISCVFSAAEYHQGNEPRPLTSTSNTGTRTQKVEDFASSRKTFL
GNIRTAFIAPKTAPKRRAVIQSDPRPVKVPRLIPLQQIQAYRDTAQKLHDHFRDNYSDIL
ETMGISDYRKDTKDIRKMSSTLVSLLASTSSLLIDNAIRKSSSPASSSKSSVLNVSKNVE
TSFVTDEAVTDSNAFMETNESVEHHWKNDDVSDKDSAYHDLVQMYADGKWESLVASAEDE
EKNLLPEQTNLRLSQQNEGFEELSQPHEDVHEKESSSDLTSIKKLVDFVHQPGPILINGY
NNTKVSSGNDGKTSKNEARGKYRMVAIKPKNTETIQINSGLAWKFVPYPPEMRDEKGRYM
KVSEQTKKTTIPTRSISSYLNDSTRPTMVSMSGSSNSKVTTGFEERKSRFLGNRLQYRSR
KCPKCSKTFPWASSLRRHIMTHTGLKPYMCARCSMRFTTRSNLLRHAYRRHNVSRDADER
HRVLIALTPRQQQEYAVTEAEQTLANPEQELNEDEEPNTPAEEVPEEVLDNDVADDDDTK
NSSSQHESQVKKEADTTNKRFSCGLCGVLFANRSNVVRHLHRLHSITKDDDNFRSLLVKI
DKQAPTPATILPSTPVIPPDVSSTSKDEDEDLKKLSSPVSKPSNSVKAETPNTSESPAAL
TPNKAFKCTICSVGFTKRNNAARHVQQQHHISRHRSNFAQLIERLNNSPENSQDEAPQES
PVVKKRQEKSSTDVKPNSEQLSKAMKMHTSPPLWRSQRVAAKRKLGQSTEQAVESTPTPP
KTRDHDHQRSKIQLSTSSYKSSRRRRH
Nucleotide sequence
Length: 5,785
>Phmamm.CG.MTP2014.S600.g10450.01.t
ATTAAGACTTTTGTGCCACAACACAACATGCTTGTTTGACAAATTATTCATGATTCTATC
AAAAGAAGAAAACAACCCAAAAAGTTTCATGGCAAAAGACTTTGAACTCGAGTAGCAGTG
CAGAGAATTGAACACAAATGAACATAATGAAAATACTGATTCTGATTCATTGTCAAAATA
GCCAGCAACTGCAAGCCGATTGTGATGCAGAACAACTTTAATAGACTGGATGATTCGTCC
AAAACTTGTGTCATCCTCAACACATTTCGTGGATATGGCAAGATGTTTTAAAATTGTTTT
TAAGTAAGCAAGCTGTTTTGCAAAATCATACACGACCTCACCCATCGTACCACGGACACA
ATCTCACATTAAAAAACACTGAGAATAAAATGTCGGAATTTACTGGTGTTATTGATTTAC
GTCATATTTCACAAGGTTAAGACCACAACCATTGTCTTTCTAAAACGTGCATGCAAAACT
AACCGATCATTAAACTCCAACGAATGTTTACTTTTGCGTCCACGGAGGCACCTTCAACAA
CTTAACGCAGCGGCAGACACAAACACCAGCTACCAGCAACACGTCCGAGTTCTGACTTTA
ACACATTGGGATATACAGACGTCTCAATCGAATAACACGTGCAAGACTTTGCACGAATGA
TAGGGTATTTGGTCACGAAAGGTTTGATCAGCAGCAAAGCAACACGCGGATGTTGGCGCA
ACTGTGTCACGTATGTGATAAGGATGACTGTACTGAGAGGCGACACTTGGTCATGTGATC
TCCTCCATGTGAACACTGGGTTGCGAAAAAAGAGAAAGACAAAGAGAAAAGACCGATGGA
AGAGGACGTTGAGTACACGCTAGGCTCACAGAGCGCAGTACCGCCGCCGGCTCCCTTGTG
CTTGTATGGCAGAGAAGCGCTTCAAGGACGCAGCAGCAGGACAAAGAGGCTGATCGCGAC
ATATTGGATCACATATTAGATTTGAGGCAAATGGTGACAAACAATCGTTCGACATATACG
TCGCTACTGGATTCAGAGAAGAAGCTCAACAACTTGTTAAAGTATCATCATATTAAATAG
ATAATACAACTTTACAGTTGCAAGACTTTAAAGTGGAAAGTTGGCTACCAACATGTCTCG
GCGCAAACAATCCGCCCCATGCAAAGTTGGAGGCAATTCACCATCAAGTTACAGCCACAC
TGAAAATGATGAGAATATTTCCAGTTTATCTTTTACTTGTTCACCATTGGATGATGAAGA
AGATTCAAAGTCATCTTCCCCAAAATCATTGATACAAAATGAAAGGGTGCCAATTGGGTT
GAAAGCATATAGCATCTCAAGTACCAACTCCAGCTTATGTTCCAGTGGAAGTAAGGCTGC
ATCATCACAAGAGGAACCCATTCAAAAGCCGCCACCAGGGGATGTTAAAACTCTATGCTT
GTCAAACTACAGCAAATCCTCTGATGAATCTGAACCAAAAAACAAAAGATTTTCAGCTCG
CATTCGTGCCAAAGTGATATCAAAAGCACAGACTCCAGGTTTGGAAAATGAGGCAAAATC
TTCATCTATAACTCTTTTGAATCAAAGTAACTCTGGGTTACATAGAAGAAATTTGCTTGA
CAAGGGCAGAAAATTGTCTTGTGAAGAGGAGTTGACATGTCCAATATGTTTCAAAACATT
TATGTCAAGATATGGACTGCTAACTCACACTGAAATCCATGGGACTCCTGAACTCAAATG
CCTCATTTGCAACTTAGGATTTAGTAGAAGATCTGCTTTTGTTGCTCATCAAGTACACTA
CCATGGTGAAGAAAAGTATACAGATGATTCCAGTTTATTTCAGGTTCAAAACGGCAAACA
AAGAAGTGTGGGAAGTGTACCAACTGGTTTCAGTGACTTGGCATTTATTGATTTTACATG
CAAAAAGTTTCCAGCAATAGCAGAGGTACATACATGCTTATTACTTAATTAGTGGATATT
TGTACCGTTTAACAAGATATAAATGTTCCAGAACTTGTGTGTTCAACAAAAACATCAACT
CACAGAAAAGGACCGAAGACATTTTTTTATGTGCAAAAAATGTGATGTTCTCTTTCCCAC
CTTGTTTGTGTTAAAGTTTCATTTGAAGCACAGTCACTCAACACCGAATGGAAATTTATC
TCTTCCAAAACTCACTATATCTGGAAAGACATACATTCTTAACAGTGAAAGGATTAGTTT
TGGTGTAAGCATTGACACCACAAGTGCTTCTACCAACCCTTCAAGTTTCCTAAATGGTTT
GATGTCTCGCAATTTTATGCAAGCCTTGCAACTTAAGAGTGTGACAGAAAGTAAAGATGT
TTCATGTGCAAACAGGCCCTGTGCTTATGGTGTTGATGACCCATCCATTCGTACCTCCCC
ACTGGTGGCCTACCTCGGTGTACCTCAATGGCTACGCAACAATAACACTCAAACTAACTG
GTGTGCAAATGAATCAGAGGCAAGCATTAGACCACCACTAAAAATGAAACTTTTACGTTG
CAAATCTGTGCCAGGCATTGATGAACCAACTATTTCATCTGCAGAAAGCTACTCTGTAAA
CAACAAAGATCTTGCAAATAGAACAAAAACAAATGATGGTTGTGCATGTATGATATGTGG
AGAGCAGTTTGCAACTAGTGGTGCAGTTGATGCTCACCGAGCTGGAACAACATGTGGAAT
TGGGGTCCGCACATCTTCAAATGGAAGAAAACTGTTCTGGTGTCGTTTGTGTGACTACGC
ATCATTTGAAAAAAGTACCATCTTAAGGCATCAAAGGACTCACACAGGTATTCGCCCTTA
CTCATGTAAATTTTGTAGCTTGGCCTTTACAACCAAAGCCAACTGTGAACGGCACATCCG
TAAACGCCACCAAGGCGACGTAGATACTGAAATGGATGTCAAATCGTCGGTTTTATGTGA
TCAAGATTTACTAAAACAAGCAAGATCGGGTGGAGAAGCTGTTCCCACACAGCAGAATAT
CACACCTTCCCGAGAGCGTTTGTTCCGGTTCCGCTGTCGGATGTGCAGAGCAATGTTTAG
TTCACGAAGTAATGGTGCTCGGCATGTTATGGATAAGCATGGCGTGTTCAGCAGAAAAGG
AGCAAACGAAATGATCTCTTGTGTGTTTTCCGCCGCCGAATACCATCAGGGGAACGAACC
ACGACCGTTAACTTCAACCTCGAATACTGGAACTCGGACTCAAAAAGTCGAAGATTTTGC
TTCTTCAAGAAAGACATTTTTGGGGAATATTAGGACGGCGTTTATAGCACCGAAAACAGC
ACCAAAGAGACGAGCTGTTATTCAATCAGACCCTCGTCCTGTCAAAGTTCCTCGTCTTAT
TCCACTGCAACAAATCCAAGCTTATAGAGACACTGCTCAAAAGTTGCACGATCACTTCCG
GGATAATTATTCAGATATTTTGGAGACGATGGGAATCTCGGATTACAGAAAAGATACGAA
AGACATTCGTAAAATGTCATCGACACTTGTGAGTCTGCTGGCATCAACTAGTTCTCTGCT
TATTGACAACGCAATCCGAAAATCATCATCGCCTGCAAGTAGCAGTAAAAGCTCTGTATT
GAACGTGTCAAAAAATGTTGAAACATCGTTCGTAACCGACGAAGCAGTGACGGATTCTAA
TGCTTTCATGGAAACGAATGAGAGCGTTGAACATCATTGGAAAAACGACGATGTCAGCGA
CAAAGATTCCGCATATCATGACCTCGTGCAGATGTACGCAGACGGAAAATGGGAAAGTCT
TGTTGCCTCGGCAGAAGACGAAGAAAAAAACCTACTACCGGAACAAACGAACTTGCGTTT
ATCTCAACAAAACGAAGGATTCGAGGAGCTCAGTCAGCCACACGAAGATGTTCATGAAAA
GGAGTCCTCTTCCGATTTGACAAGCATAAAAAAATTGGTGGACTTTGTTCATCAACCAGG
ACCTATTCTTATAAATGGTTACAACAACACCAAGGTTTCAAGTGGAAATGATGGCAAAAC
ATCAAAAAATGAAGCAAGAGGAAAATATAGGATGGTCGCCATAAAACCAAAGAACACTGA
GACGATCCAGATTAACTCGGGTTTAGCTTGGAAGTTTGTTCCATATCCTCCTGAGATGCG
CGACGAGAAAGGAAGGTATATGAAAGTTTCGGAACAGACAAAGAAAACGACAATCCCCAC
CCGTTCCATCTCGTCATACCTCAATGATTCCACGCGTCCAACGATGGTGTCTATGTCTGG
GTCCTCTAATTCAAAAGTAACTACAGGTTTTGAAGAAAGAAAAAGCCGCTTTCTGGGAAA
TCGCTTACAGTACCGCAGCAGAAAGTGTCCAAAGTGCAGTAAAACATTTCCTTGGGCTTC
TTCTTTAAGAAGACACATAATGACACACACAGGATTAAAGCCATACATGTGTGCTCGCTG
CTCCATGAGATTCACGACTCGATCCAACTTGTTGCGTCACGCCTACCGACGTCATAACGT
TTCACGAGATGCGGATGAGCGACACCGAGTGTTGATAGCTCTTACACCACGACAACAGCA
GGAGTATGCGGTGACTGAAGCTGAACAAACTCTTGCAAATCCTGAACAAGAATTGAACGA
AGATGAGGAACCGAATACGCCTGCGGAAGAAGTTCCGGAGGAAGTTCTGGACAATGACGT
TGCTGACGACGACGACACGAAAAACTCGAGTTCACAACACGAATCACAGGTGAAGAAAGA
AGCGGATACTACAAACAAGCGATTCAGTTGCGGCTTATGTGGCGTTTTGTTTGCCAACCG
ATCCAATGTGGTTCGTCATTTGCACCGCCTGCATAGCATCACTAAAGATGACGACAACTT
CCGGTCGTTGTTGGTGAAGATTGATAAACAAGCACCGACACCAGCCACTATTCTCCCATC
CACCCCTGTTATTCCACCTGATGTAAGCTCAACGTCGAAAGATGAAGATGAAGACCTGAA
AAAATTAAGTAGTCCTGTGTCCAAACCTTCTAACTCGGTAAAGGCTGAAACACCAAATAC
CAGCGAAAGTCCAGCGGCATTAACACCAAATAAGGCTTTTAAATGCACCATCTGCTCTGT
GGGTTTCACGAAGCGGAACAATGCGGCTCGTCACGTTCAACAGCAACATCACATATCGCG
TCATCGCTCCAACTTCGCGCAACTTATTGAGCGACTGAATAATTCACCCGAAAACTCCCA
GGACGAAGCACCTCAAGAATCACCGGTTGTCAAAAAACGACAAGAAAAATCGAGTACTGA
CGTCAAACCGAACTCAGAACAATTGTCAAAGGCGATGAAAATGCATACTTCCCCGCCTCT
TTGGAGAAGCCAAAGAGTTGCTGCAAAACGGAAGTTGGGTCAATCTACTGAACAAGCTGT
AGAATCGACACCTACACCGCCCAAAACCAGAGACCATGATCACCAACGATCAAAGATACA
ACTGTCAACGTCATCTTACAAATCGTCACGGCGCCGAAGACATTAAACTAATTTGTTCAG
GATATTCTCCAAAGACCTCCACCGTCACTTCCACGTCAAAGATCGAAACAATACTGCTGA
TACTTCAATATTTTTTGGTTCCCCCTTATTTTAAATCTCTGTGTTAAACTGTTTTTATCA
AGAAAGGGGTTGATTGTTTGACTGAAATCATGTCGATTGTGTTTGTACCTTTTTGATGAG
TGAGTGAAATCGTGTATGTTATTTCATTAAAATTCTAGTTAAAATGTGTACGATTGGTTG
GTTTTATTAACAATTATTGTCGCAC
| SMART |
Znf_C2H2_type (IPR013087) - T[22-45] 0.93 - T[207-227] 210.0 - T[245-267] 11.0 - T[273-296] 0.012 - T[343-366] 1.7 - T[780-802] 4.6E-4 - T[808-831] 0.053 - T[921-944] 0.27 - T[1026-1049] 0.1 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[24-45] . - T[275-296] . - T[345-366] . - T[782-802] . - T[810-831] . - T[923-944] . - T[1028-1050] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[243-293] 3.75E-11 - T[780-827] 9.24E-14 - T[919-1045] 7.44E-7 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[245-272] 12.009 - T[273-301] 10.616 - T[780-807] 13.9 - T[808-836] 10.845 - T[921-949] 10.741 - T[1026-1054] 9.224 |
| Pfam |
Znf_C2H2_type (IPR013087) - T[781-802] 0.0017 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RREB1_HUMAN | 32.778 % | 95.5 | 1.29E-19 |