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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C14.471.v1...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S58.g02094.02.t

Possible name(s)

GABARAP; GABARAPL1; GABARAPL2

Gene model

Phmamm.CG.MTP2014.S58.g02094

Location

S58 [125,578 / 127,343]

Sequences

Amino acid sequence

Length: 118

>Phmamm.CG.MTP2014.S58.g02094.02.p
MKWQYKEEHTFDKRRNEGEKIRRKYPDRVPVIVEKAAKARIGDLDKKKYLVPSDLTVGQF
YFLIRKRIHLRPEEALFFFVNNVIPPTSTTMGQLYQEHHEEDFFLYIAYSDESVYGSN

Nucleotide sequence

Length: 357

>Phmamm.CG.MTP2014.S58.g02094.02.t
ATGAAGTGGCAATACAAGGAAGAACACACATTTGATAAGAGGAGAAATGAAGGTGAAAAA
ATCAGAAGAAAGTATCCTGACCGAGTACCAGTTATTGTGGAGAAGGCAGCAAAGGCAAGA
ATTGGAGACCTTGATAAGAAAAAATATTTGGTTCCCTCTGATCTTACAGTGGGCCAGTTT
TATTTTCTGATTCGCAAGAGGATTCATCTTCGCCCAGAAGAGGCGCTATTCTTTTTTGTG
AACAATGTGATTCCACCAACAAGCACCACAATGGGTCAGCTGTACCAGGAGCACCATGAA
GAGGATTTTTTTCTGTACATCGCATACAGTGATGAAAGTGTTTATGGATCAAACTAA

InterProScan

PANTHER
Atg8-like (IPR004241) - T[1-117] 1.8E-78
SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[1-116] 3.1E-43
CDD
Atg8-like (IPR004241) - T[5-116] 6.23675E-70
Pfam
Atg8-like (IPR004241) - T[13-116] 7.4E-49

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GBRAP_HUMAN 91.379 % 219 6.19E-76
GBRL1_HUMAN 82.759 % 206 1.56E-70
GBRL3_HUMAN 78.448 % 193 2.06E-65