- Transcript 'Phfumi.CG.MTP2014.S6...' >
- Clone 'AHC0AAA223YK08' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'Phmamm.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S585.g10304.01.t
Possible name(s)
RNF144A; RNF19A; RNF19B
Gene model
Location
S585 [18,828 / 31,795]
Amino acid sequence
Length: 727
>Phmamm.CG.MTP2014.S585.g10304.01.p
PSQKTRRFPRFRIRTGVFSRNKRCSAKSDKKADAVNINSDTSAPSTSAYKNESKNTKPDE
KLSLGASAVAETKIEAKAESSAKSTSSVLECPLCLVTQSIENFPQLSTCHHRSCMDCLRQ
YLAIEISESRVNLMCPECQERLHPVDMKSILDTNPQLMQKWEEFTLRRFLSIDPDCRWCP
APDCGFAVIASGCASCPRLKCQRDGCETEFCYHCRQEWHPDQTCDAAHLQRRKQLRIRNN
SVAYSQGSNFHDEIKPCPKCGALIVKMNDGSCNHMTCTVCDAEFCWLCLQEITDLHYLSP
SGCTFWGKKPWSRKKKILWQLGLLIGAPLGIGLVAGIAVPAIIVGLPVWVARRIMAQFEN
KENVSKYKRNLLVATCVAGSVILSPALAALAVGVGVPVMLLYVYGVVPFSLCRTGSYGIT
SRNPNGSNSALSMLPMGLRLDLGGTSGQPGSSTAEDTGNFHSGNGSINTRLGPINPSIGE
ASVGGMTMGSFNMSRGSNMDKVGRIDPDGASTIAIAGTSITGSLSGISGAGALGSNKVEV
HHSTKDVDQQSTHTQISVGSAPNITSVQVHMHDNVSEHSVTSAPINSYVPPGSAIKKSYS
AKSLGSKRKTKPIKCSSASAKVPGLKKTSIDEPHGLPVVDDMSPHHTSDISTAPKMGTVD
ENASASITIVNECENITDATPEMKSSPNSSEDATCDASSCSSNNPLLSSPTISIETTLSS
DVTEVIV
Nucleotide sequence
Length: 3,911
>Phmamm.CG.MTP2014.S585.g10304.01.t
CCGAGCCAAAAAACAAGAAGGTTTCCACGGTTCAGGATACGCACAGGCGTTTTTTCAAGG
AACAAGCGGTGCAGTGCAAAAAGTGACAAGAAAGCAGATGCTGTGAATATTAATTCCGAC
ACTAGTGCCCCATCTACATCTGCCTACAAAAATGAATCGAAAAACACAAAACCCGATGAA
AAACTCTCATTAGGAGCTTCTGCAGTTGCTGAGACAAAGATAGAAGCCAAAGCAGAATCA
AGTGCCAAAAGTACCTCAAGTGTATTAGAATGCCCGCTTTGCCTTGTAACACAGTCAATA
GAAAACTTTCCCCAACTGAGTACATGCCATCACCGGTCGTGCATGGATTGTCTTCGGCAG
TATTTAGCAATCGAGATTTCCGAAAGCAGGGTAAATTTAATGTGTCCAGAGTGTCAGGAA
CGACTACATCCTGTTGATATGAAGTCTATACTTGACACAAATCCTCAGTTGATGCAGAAA
TGGGAAGAGTTTACGCTGCGACGATTTCTCTCAATTGATCCTGACTGCAGATGGTGTCCA
GCACCTGATTGTGGGTTTGCCGTAATTGCCAGTGGTTGTGCCAGCTGCCCACGTCTCAAG
TGCCAGAGAGATGGCTGCGAAACGGAGTTCTGTTACCACTGCCGACAGGAATGGCATCCA
GACCAGACCTGTGACGCCGCCCACTTACAAAGAAGAAAACAACTTCGAATACGAAATAAC
TCAGTTGCGTACAGCCAAGGTTCCAACTTTCACGATGAAATAAAGCCTTGTCCAAAATGT
GGAGCGCTCATTGTGAAAATGAATGATGGATCATGTAACCACATGACTTGCACTGTTTGC
GATGCCGAGTTTTGCTGGCTGTGTTTGCAAGAAATAACAGATCTACATTATTTAAGTCCA
TCAGGATGTACTTTCTGGGGTAAAAAACCTTGGAGTAGAAAGAAAAAAATACTCTGGCAA
CTGGGCTTGCTTATCGGTGCCCCACTGGGTATTGGTCTTGTTGCTGGTATCGCCGTCCCT
GCCATCATTGTTGGCTTGCCTGTTTGGGTTGCCAGAAGAATTATGGCCCAGTTTGAAAAC
AAGGAGAATGTTTCAAAATACAAGAGAAACTTGCTAGTTGCCACTTGTGTTGCTGGATCT
GTCATACTTTCACCGGCTCTTGCCGCTTTAGCTGTTGGTGTTGGTGTCCCTGTGATGCTG
CTCTACGTGTACGGAGTCGTGCCTTTCTCATTATGTCGTACCGGGAGTTACGGAATTACC
TCACGTAATCCGAACGGCAGCAACTCTGCCCTTTCTATGCTTCCCATGGGTCTTAGACTT
GATCTAGGTGGTACGTCTGGTCAACCAGGTTCCTCCACAGCTGAGGATACTGGCAATTTT
CACAGTGGCAATGGCTCAATCAACACCCGACTGGGTCCTATTAACCCAAGTATTGGCGAA
GCAAGTGTTGGTGGGATGACGATGGGCAGTTTTAATATGTCGCGCGGCAGTAACATGGAT
AAGGTGGGAAGAATAGACCCAGATGGCGCCAGTACAATCGCTATTGCAGGCACAAGTATT
ACAGGAAGTTTATCAGGAATCAGTGGAGCAGGAGCCCTTGGATCAAACAAAGTTGAAGTT
CACCACAGTACAAAGGACGTTGATCAACAATCTACACATACACAGATATCTGTGGGTTCT
GCACCAAATATTACATCTGTACAGGTCCACATGCATGACAATGTGTCAGAACACAGCGTC
ACAAGTGCTCCGATAAATTCTTACGTCCCTCCAGGAAGCGCCATAAAAAAATCCTATTCT
GCAAAATCGCTCGGATCAAAACGGAAAACTAAACCAATTAAATGTTCATCTGCTTCTGCA
AAAGTCCCAGGTTTAAAGAAGACGAGCATTGATGAGCCACACGGCTTGCCTGTAGTTGAC
GATATGTCTCCTCATCACACCAGCGATATTTCCACAGCACCTAAGATGGGCACCGTAGAT
GAGAACGCCTCAGCGTCAATAACCATTGTGAATGAATGCGAAAACATCACTGATGCTACT
CCCGAAATGAAGTCATCCCCAAACTCTTCGGAGGATGCAACTTGCGATGCGAGCAGCTGC
AGCAGTAACAATCCTCTTTTGTCTTCCCCGACCATTTCAATTGAAACGACATTATCTTCT
GATGTGACAGAAGTCATAGTTTAAATTTTCTTTAATTGTTTTCTGCCAAAGTTACGAAGG
GTGAATCTAATTTGTATCTTAACCGACCACGGGCAATATCTTGCCTTAGCAAAAAAGTGG
GGTATGTCATTTTATTGTACAAAGTTATAACAGACACCTCAAACAACCATCTATATTAAC
ACAGAAATCTTTTCTCTGTACAATCAAATAACATCCCAACACTATGTCTAAACCAGTAAG
CCCCTACTAAAACTGATTTTCACAGCAGCGCTACCATTGATGCAGAAAGTTTTGTTTGTG
CATATTTTCCGTAGCGTGGTGGCATGCAAATGTAGGAAATATTTTGCGTTTCTGATTCTG
TACTAATTTATGCTCTATTGGTTTACGAAAATTCATTGGTCTGTTTTGTTGTGTGGGTTT
CTATTGCTTGTAAACAGCTTTATCTTGCTTCTTTGTGTAATGAAGGGCCTGTTTGGCACC
TGCAAAAGGCATTCAAAAATGCAGTAATTACGAAATGCCCTGATTTGACGTAGATTACAT
TTTGACCATAGAATTTATGAACTAAAAACGACATGCTAGGATAAACAGCTGTAAATTCTA
CATATACAGCATTTTGGTAGAGTTTCTTTTATCAGCATCAACAAATAAAAGTAACATATT
CAGTGTCCTAGTTCAAAACTCGATTGAAATTAACTTACTGAGATATGAGTTCACCTTTGG
TGCTTTTGTTTGAGTGTTGGCATTTCCTATGTATTCTCCATTATAACATATTGCGCAGCT
GTTTGAAAGCATCTAGGTGAAAATCTCATTTGCTTATTGTCCTTGTTATTTTTCTGCTTT
TTAAATCAGAATTTCTCTTAACCGTTTGATTGGAAAATGCCCCCTTGACGAGAAAGCCAA
GTTTTCTGTGAATGAACTACAACTGTTTTTGAATCTTATTTTGGGCAAATCAAAATACTA
TGTGCCCTGCCAGACTCACTTTGTCGTTGGAGACTTGCACAAGAAAGTTTCCCCAGTGAC
ATGCAATGCAAACCTTTGAGATTTATTTTTGTGTTCAGTAGATTTAGTGGTTTGTTTGTT
TGTTTTTTATTTTGTCAACAGCTTTCATTTTGCTTACGAACCTTGTAAAGGTCCCTTGTA
TGCGACGATTAAATACCTGCTTGAAAAATGTCTACTTCAAAACAGTTGGAGCAGTTAGAA
AGGACATTACATGTCAAACCAATGAAGTACATAGCACAAAATATTGTGTGCAACTTGGAA
TGTATGTTTACAAAGATGAAACGCGTACAAACTAAGACATTCTTTACACTTTCAGGTAAA
ATATATCGCTTGTGTTTAAAGCATTTTACCAAGTATCTACAACAACACAGTGTAGAAAAT
AGGATTTTGATGATATTTCATGACACAGTGCGTAAGTACAGTCCATGTTGTTTTTCAGTT
TTTTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAACAAACACAAAATGACTACATGGACT
GCGGCATAACAAATGATAAAATAAACTATGATGATTTGATCAGAATACAAACTACAATTT
GTCTTTGTGATAAGATTCTTAGATTGCTCCATCCACCAAATATCCTTCTTCATCAAAAAT
AATTGAATTGTTGTGCAATGGCGAGAATAGTAAGATCATGATTGAATGAGACAAAATAGC
TGATGTATTCT
| PANTHER |
E3_UB_ligase_RBR (IPR031127) - T[72-529] 2.3E-153 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[84-171] 5.8E-16 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[91-139] 10.542 |
| Pfam |
IBR_dom (IPR002867) - T[159-224] 3.9E-13 - T[251-296] 2.7E-8 |
| SMART |
IBR_dom (IPR002867) - T[159-224] 1.0E-22 - T[231-303] 0.009 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| R144A_HUMAN | 25.651 % | 86.3 | 1.75E-18 |
| RN19A_HUMAN | 49.916 % | 552 | 0 |
| RN19B_HUMAN | 49.808 % | 503 | 3.96E-169 |