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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S6...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S585.g10303.02.t

Possible name(s)

DEPDC1; DEPDC4; DEPDC7

Gene model

Phmamm.CG.MTP2014.S585.g10303

Location

S585 [10,617 / 18,650]

Sequences

Amino acid sequence

Length: 660

>Phmamm.CG.MTP2014.S585.g10303.02.p
RNMKKSYDESFTGSNAVDVLFHFVKQNPDQFTNSSFISRDNIIRLCQSFIDNGVFEPIGT
SVESDRCIKFEDSASALYHFMDKPGTGDATATKTVNNRQVLKEIDGDIRNSLDHISISTT
NKKDNASTTPKTKHMLIPTRRSGNRSRFPSFSGSSAQSFKESFLNNAQVSDSEEDDKVPR
TGRRLKRSSSLVGMVMKRSSSESNVPKGKSSSTSSASDSEHTDGKDKKSDEIGRGGKLRL
SQRLTFRKKSFRKNEVHSCVIKNPSAANGGTASVFSTDDDSDAYVRRKLSTQELSHLRRE
CVRVRLLQILDLQFVDSLITSPTDKKAHQDTEAHVGNGVSTHGVQYSEVASAYDSNDKWI
STALKVLQHLPNGYNILCKHARDHCNMKKLKMFFAISEYYKSLPKPIIEESMEEIVSSLV
EMLSTKPVSESLEATQLFLHLLPDSVYNELKDLVLFLCSVIKSKDIVLIPSCDNKSVILQ
TFPSAIFCTEKLDTNRSDVAVAGLFLFILEHRHQVFSLPTSVAAAFKWKRRLLEKGEVES
PSLVQDSTFCAMISNEEFNQQRVEFTQMQVSELARSLSSDPNLPPKKKKDLLKKLQASHS
SAYERSRGPMKATHPQPVNTKQRPETPQLNLKPHHPILRAPSSDPLSRRRNKSRQKQIYV

Nucleotide sequence

Length: 2,284

>Phmamm.CG.MTP2014.S585.g10303.02.t
AGAAATATGAAAAAATCTTACGACGAATCCTTCACAGGATCAAATGCTGTTGATGTTTTA
TTCCATTTCGTCAAGCAAAATCCAGATCAGTTTACAAATTCATCTTTCATATCAAGAGAC
AATATTATCCGCTTGTGTCAGTCGTTTATTGACAATGGTGTATTTGAGCCGATTGGCACC
TCGGTTGAAAGTGATCGTTGTATAAAATTTGAAGATTCGGCATCAGCACTTTACCACTTT
ATGGATAAACCGGGCACTGGTGATGCAACTGCAACAAAGACAGTCAACAACCGACAAGTG
CTTAAGGAAATAGATGGAGATATTAGAAACAGCTTGGACCATATTTCAATCTCCACTACA
AACAAGAAAGACAATGCTTCCACTACACCAAAAACAAAACACATGTTAATACCAACAAGA
AGATCTGGAAACCGTTCACGATTTCCATCGTTTAGCGGTTCTTCTGCACAATCCTTCAAG
GAATCGTTTCTGAACAATGCCCAAGTTAGTGATTCTGAGGAGGATGACAAAGTTCCTCGC
ACTGGACGACGGTTGAAGAGATCATCAAGTCTTGTCGGAATGGTTATGAAACGATCTTCT
TCAGAATCAAATGTCCCAAAAGGAAAATCATCCAGCACATCATCTGCATCAGATAGTGAA
CACACTGACGGCAAGGATAAGAAATCTGATGAAATTGGTAGAGGAGGAAAGCTTCGTTTG
AGTCAAAGACTGACATTCCGTAAAAAATCCTTCAGAAAGAACGAGGTTCATTCCTGTGTG
ATAAAGAATCCATCAGCTGCTAATGGAGGAACAGCCTCAGTTTTTAGCACAGATGATGAT
TCTGATGCTTATGTAAGAAGGAAATTATCGACGCAAGAATTGTCCCATCTTCGACGTGAG
TGTGTAAGGGTTCGACTTCTGCAAATTCTTGACCTTCAATTTGTGGACAGCCTTATCACA
TCACCCACTGATAAGAAAGCTCACCAAGATACAGAGGCCCATGTAGGCAATGGTGTATCA
ACACATGGCGTACAGTACAGTGAAGTAGCAAGTGCATATGACAGCAATGACAAGTGGATT
TCTACAGCCCTAAAAGTATTACAGCATCTCCCAAATGGATACAACATTTTGTGTAAACAC
GCAAGGGATCATTGTAACATGAAAAAGTTGAAGATGTTTTTTGCCATTTCGGAATATTAC
AAGTCTTTACCAAAACCCATCATTGAAGAGTCAATGGAGGAGATTGTTAGCTCGCTGGTT
GAAATGCTTTCAACAAAACCGGTTTCTGAGTCTTTGGAAGCAACCCAGCTATTTCTACAT
CTCCTGCCCGACTCTGTTTATAACGAACTCAAGGATCTTGTTTTGTTTCTGTGTTCTGTA
ATTAAGAGCAAAGATATTGTTCTTATTCCATCGTGTGATAACAAGTCAGTGATTCTGCAA
ACTTTTCCATCGGCAATCTTCTGCACTGAGAAACTGGATACAAACAGGTCGGATGTAGCA
GTAGCAGGTCTCTTCCTGTTTATCCTCGAGCATCGTCACCAAGTTTTCTCCCTCCCAACA
TCTGTTGCAGCAGCATTTAAATGGAAACGAAGATTATTGGAGAAAGGCGAGGTGGAAAGT
CCTTCACTCGTACAAGATTCAACTTTTTGTGCCATGATTAGCAATGAGGAGTTTAACCAA
CAGCGTGTTGAGTTCACTCAAATGCAAGTCTCTGAACTTGCCCGGTCACTCAGCAGCGAT
CCAAACTTGCCTCCCAAAAAGAAGAAAGACCTGCTGAAGAAGTTGCAAGCATCTCATTCT
TCTGCATATGAAAGATCCCGTGGTCCAATGAAAGCAACGCACCCCCAACCTGTTAACACA
AAACAGCGGCCTGAAACCCCACAGTTAAATTTAAAGCCCCATCACCCAATTTTGAGAGCC
CCGAGCTCTGACCCGCTTAGCCGACGTCGAAACAAATCTCGTCAAAAACAGATTTATGTT
TGACTTGTGAGATTTGAGAATATATGGTGCAGAACACTGAGGCCTGAACAGAGCTTTCTA
TAAGTTGGTATTTGTCAGTATTAGCAGCTTGCCAATGACTCTTGCTAAAAAGTAAGTATT
TTCATTACTTTATGTGCTATGTTTATTCATTCTACTAAACATGGCCTACATGCTATGTTA
CGTATTAGCTATCTTATTTTTTTGGCAATGAATTGGTGAGTATAATCACATATTGTCTGT
ACTGTAAGTTTTAGATTATAAAGGTCAGTTGTTTTCCATACATTTATTCTGTATTGTGTC
AATG

InterProScan

Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[1-81] 1.7E-14
ProSiteProfiles
DEP_dom (IPR000591) - T[1-82] 10.8
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[3-86] 6.8E-7
Pfam
DEP_dom (IPR000591) - T[3-80] 2.0E-8
SUPERFAMILY
Rho_GTPase_activation_prot (IPR008936) - T[398-466] 6.59E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DEPD7_HUMAN 24.901 % 84.7 3.64E-17