Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phmamm.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S585.g10303.01.t

Possible name(s)

DEPDC1; DEPDC4; DEPDC7

Gene model

Phmamm.CG.MTP2014.S585.g10303

Location

S585 [10,159 / 18,349]

Sequences

Amino acid sequence

Length: 750

>Phmamm.CG.MTP2014.S585.g10303.01.p
MAANMNCSPATGSNAVDVLFHFVKQNPDQFTNSSFISRDNIIRLCQSFIDNGVFEPIGTS
VESDRCIKFEDSASALYHFMDKPGTGDATATKTVNNRQVLKEIDGDIRNSLDHISISTTN
KKDNASTTPKTKHMLIPTRRSGNRSRFPSFSGSSAQSFKESFLNNAQVSDSEEDDKVPRT
GRRLKRSSSLVGMVMKRSSSESNVPKGKSSSTSSASDSEHTDGKDKKSDEIGRGGKLRLS
QRLTFRKKSFSSENAPEPTDIKVQASSIKTCHITWKKSQPTPTESNITHQKKHYLDPRRC
SYAVKSECTKPPRSMRRMISTPIFLAKSKKQAKPLSFQPVDPNENTIPFEARLSHSQYST
KSTPMMKHRLRSSTLSQPEIKNKLSVRKPCDTPNFASPPKQRKRDTDAIHETPSRKNEVH
SCVIKNPSAANGGTASVFSTDDDSDAYVRRKLSTQELSHLRRECVRVRLLQILDLQFVDS
LITSPTDKKAHQDTEAHVGNGVSTHGVQYSEVASAYDSNDKWISTALKVLQHLPNGYNIL
CKHARDHCNMKKLKMFFAISEYYKSLPKPIIEESMEEIVSSLVEMLSTKPVSESLEATQL
FLHLLPDSVYNELKDLVLFLCSVIKSKDIVLIPSVDSTFCAMISNEEFNQQRVEFTQMQV
SELARSLSSDPNLPPKKKKDLLKKLQASHSSAYERSRGPMKATHPQPVNTKQRPETPQLN
LKPHHPILRAPSSDPLSRRRNKSRQKQIYV

Nucleotide sequence

Length: 2,253

>Phmamm.CG.MTP2014.S585.g10303.01.t
ATGGCGGCAAATATGAATTGTTCACCAGCTACCGGATCAAATGCTGTTGATGTTTTATTC
CATTTCGTCAAGCAAAATCCAGATCAGTTTACAAATTCATCTTTCATATCAAGAGACAAT
ATTATCCGCTTGTGTCAGTCGTTTATTGACAATGGTGTATTTGAGCCGATTGGCACCTCG
GTTGAAAGTGATCGTTGTATAAAATTTGAAGATTCGGCATCAGCACTTTACCACTTTATG
GATAAACCGGGCACTGGTGATGCAACTGCAACAAAGACAGTCAACAACCGACAAGTGCTT
AAGGAAATAGATGGAGATATTAGAAACAGCTTGGACCATATTTCAATCTCCACTACAAAC
AAGAAAGACAATGCTTCCACTACACCAAAAACAAAACACATGTTAATACCAACAAGAAGA
TCTGGAAACCGTTCACGATTTCCATCGTTTAGCGGTTCTTCTGCACAATCCTTCAAGGAA
TCGTTTCTGAACAATGCCCAAGTTAGTGATTCTGAGGAGGATGACAAAGTTCCTCGCACT
GGACGACGGTTGAAGAGATCATCAAGTCTTGTCGGAATGGTTATGAAACGATCTTCTTCA
GAATCAAATGTCCCAAAAGGAAAATCATCCAGCACATCATCTGCATCAGATAGTGAACAC
ACTGACGGCAAGGATAAGAAATCTGATGAAATTGGTAGAGGAGGAAAGCTTCGTTTGAGT
CAAAGACTGACATTCCGTAAAAAATCCTTCAGCTCTGAAAACGCACCAGAACCCACTGAT
ATTAAAGTCCAAGCCAGCTCAATCAAGACTTGTCACATAACTTGGAAAAAGTCTCAGCCA
ACACCTACAGAATCCAACATTACACATCAAAAAAAGCATTATCTAGATCCACGACGATGT
AGCTATGCTGTCAAAAGTGAATGTACAAAACCTCCACGTTCGATGCGAAGAATGATTTCT
ACTCCAATTTTTCTTGCAAAATCAAAGAAGCAAGCCAAACCTCTCAGCTTCCAACCGGTC
GACCCAAATGAAAATACCATCCCATTTGAAGCAAGACTCTCACACTCACAATACTCTACT
AAATCAACACCTATGATGAAACACAGGCTAAGAAGCAGCACTCTTTCCCAACCCGAGATC
AAGAATAAGTTATCTGTGCGAAAACCTTGTGATACCCCTAACTTTGCCAGTCCTCCAAAG
CAAAGGAAGAGAGATACAGATGCCATCCATGAAACCCCCTCCAGAAAGAACGAGGTTCAT
TCCTGTGTGATAAAGAATCCATCAGCTGCTAATGGAGGAACAGCCTCAGTTTTTAGCACA
GATGATGATTCTGATGCTTATGTAAGAAGGAAATTATCGACGCAAGAATTGTCCCATCTT
CGACGTGAGTGTGTAAGGGTTCGACTTCTGCAAATTCTTGACCTTCAATTTGTGGACAGC
CTTATCACATCACCCACTGATAAGAAAGCTCACCAAGATACAGAGGCCCATGTAGGCAAT
GGTGTATCAACACATGGCGTACAGTACAGTGAAGTAGCAAGTGCATATGACAGCAATGAC
AAGTGGATTTCTACAGCCCTAAAAGTATTACAGCATCTCCCAAATGGATACAACATTTTG
TGTAAACACGCAAGGGATCATTGTAACATGAAAAAGTTGAAGATGTTTTTTGCCATTTCG
GAATATTACAAGTCTTTACCAAAACCCATCATTGAAGAGTCAATGGAGGAGATTGTTAGC
TCGCTGGTTGAAATGCTTTCAACAAAACCTGTTTCTGAGTCTTTGGAAGCAACCCAGCTA
TTTCTACATCTCCTGCCTGACTCTGTTTATAACGAACTCAAGGATCTTGTTTTATTTCTC
TGTTCCGTAATTAAGAGCAAAGATATTGTTCTTATTCCATCGGTAGATTCAACTTTTTGT
GCCATGATTAGCAATGAGGAGTTTAACCAACAGCGTGTTGAGTTCACTCAAATGCAAGTC
TCTGAACTTGCCCGGTCACTCAGCAGCGATCCAAACTTGCCTCCCAAAAAGAAGAAAGAC
CTGCTGAAGAAGTTGCAAGCATCTCATTCTTCTGCATATGAAAGATCCCGTGGTCCAATG
AAAGCAACGCACCCCCAACCTGTTAACACAAAACAGCGGCCTGAAACCCCACAGTTAAAT
TTAAAGCCCCATCACCCAATTTTGAGAGCCCCGAGCTCTGACCCGCTTAGCCGACGTCGA
AACAAATCTCGTCAAAAACAGATTTATGTTTGA

InterProScan

Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[8-85] 2.7E-10
SUPERFAMILY
ARM-type_fold (IPR016024) - T[529-687] 9.78E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value