- EST 'AHC0AAA232YC10_RM1' >
- Transcript 'Phmamm.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S575.g10210.02.t
Possible name(s)
DEAF1; SAMD11; SAMD7
Gene model
Location
S575 [60,824 / 70,327]
Amino acid sequence
Length: 556
>Phmamm.CG.MTP2014.S575.g10210.02.p
RGDKRKTSKSSTDSRQGRNQNVEKTTVYHIDTTLSIDNDLKETTGNIGQNRSCKQVGDKG
FKSTDLRLNVAKHQNDAEPSEKNANGCNPTKPLVSNNMQVDEPDGATTNNETISHGDDKD
ELQKENEDCSVKSNSHQNVASNFYSSLNLLATRAFINVKLEPVEVSVAERCGKDYMSSLE
NRTSTAGSNTSVSLYQRRSESQSPVSHDHDLQYLQSHAELSPQTFAEQLRHNDSASMVVC
RSLPGKTSNQGLDSTNTSGAGRTNGSSLHHFVTRYTIEKPDESSRLGLDICLENDSSNEA
IMEVECGGNKGLLYVTKLCQGSKGQSILFNDEWLTPNEFQFISGRETAKDWKRSIRHCGK
SLKTLMTKGVLQVHPPVCECDYCKGQASGKTENTKPGVGLQNDTSLCADDMNDQPLSLVR
NDASATQSLKQGREGGLNSIISQLHNKRANIGVDAVSPGAMESLDLRVSSSTNGSGNRKR
RNDSSHNDYASDVDEDHSVSSSKKYLSDADENYRNQSYDQNSGNTQRQRYVKNNLLSFIS
IIVFYNFLIVLVQYAA
Nucleotide sequence
Length: 3,081
>Phmamm.CG.MTP2014.S575.g10210.02.t
CGAGGTGACAAACGAAAAACATCCAAAAGCAGTACTGATTCGCGGCAAGGAAGAAATCAA
AACGTCGAAAAGACAACAGTGTACCACATTGATACAACCCTGAGCATAGATAATGACTTG
AAAGAAACAACCGGGAACATAGGACAAAACCGAAGTTGCAAACAAGTTGGAGACAAAGGA
TTTAAATCGACTGATCTGAGATTGAACGTTGCTAAGCATCAAAACGACGCAGAACCTTCC
GAAAAAAATGCCAACGGTTGCAATCCTACAAAGCCGTTGGTGTCAAACAACATGCAAGTG
GATGAACCTGACGGGGCTACAACGAACAACGAAACTATCAGTCACGGCGATGACAAGGAT
GAACTACAGAAAGAAAACGAAGATTGTTCGGTCAAGTCCAATTCGCACCAAAATGTCGCT
TCAAATTTTTACTCAAGCTTAAATTTGCTGGCTACTCGTGCTTTTATCAACGTAAAACTG
GAACCGGTTGAAGTATCGGTGGCAGAAAGATGTGGAAAAGATTACATGTCTAGTTTAGAA
AACAGGACAAGCACTGCAGGGAGTAATACCAGTGTAAGCCTTTACCAACGCAGAAGTGAA
AGTCAAAGTCCCGTTTCCCACGACCATGACCTGCAATATTTGCAATCTCACGCGGAACTT
TCCCCACAAACATTTGCCGAGCAGTTGCGGCACAACGATTCGGCAAGCATGGTTGTTTGT
CGATCACTACCCGGAAAAACATCTAACCAGGGTTTAGACTCTACAAATACAAGTGGTGCA
GGCCGAACCAATGGATCCTCGCTACATCATTTTGTTACTCGATACACCATCGAAAAACCC
GACGAATCATCGAGGTTGGGACTTGACATATGCCTGGAAAATGATAGCTCCAACGAGGCA
ATAATGGAAGTGGAGTGTGGGGGAAACAAAGGTCTACTGTACGTAACCAAACTTTGCCAA
GGAAGCAAAGGTCAGTCAATTCTTTTTAACGATGAATGGTTGACCCCGAATGAATTTCAA
TTTATAAGCGGAAGAGAAACTGCCAAAGACTGGAAGCGGAGTATTCGTCACTGCGGAAAA
AGCTTGAAAACTTTAATGACAAAGGGTGTTCTGCAAGTTCATCCACCTGTGTGCGAATGT
GATTATTGCAAAGGACAAGCGTCGGGTAAAACCGAAAATACCAAACCGGGTGTAGGTTTG
CAAAACGACACTTCCTTGTGCGCTGACGACATGAACGATCAACCTTTGTCTCTTGTACGG
AATGATGCTTCAGCAACACAATCTTTAAAACAAGGACGCGAGGGTGGTCTAAATTCTATC
ATATCCCAATTGCATAACAAAAGGGCAAACATTGGAGTTGATGCAGTATCCCCAGGTGCT
ATGGAATCCTTGGATTTGAGGGTGAGTTCTTCCACCAACGGTTCAGGGAACAGAAAAAGA
CGAAATGATTCCTCTCATAATGACTATGCTAGTGACGTTGATGAAGATCATTCCGTTTCC
TCGTCGAAAAAATATCTCTCTGATGCAGATGAAAATTACCGAAATCAGAGTTACGATCAA
AACAGTGGAAACACCCAAAGACAACGGTACGTCAAAAACAATTTGCTTTCATTCATTTCA
ATTATCGTATTCTATAATTTTTTGATTGTACTCGTACAGTACGCAGCCTAATCCACGTTG
GGAGAACGAAAGATCAGCGGACCCGCAAAACACTTTTAACCAGTGGTTAAACACCGAAAA
TGGCTTCAGGCCGTTTCATCGTCCAGGTTTTGGATATAGCGAGTATGCTTTATACGATGC
AATGAAAAGGGCAGTCGCTTCGGTTGCAGCTCAACCAAATGGTTACTGCACACAGCCTCC
ACCTATGACCACGCGCCACACCGGAGGAGGCAAGAAGCAGCCCATGATGGAATTGACTTC
GCCACGCAACAAAAACCTGGACAGAAAGATGTCAGACGTATACTCTGACTGGGATTATCC
AAAACCAATACCTCAAAACATGGAGCCTTTAAACGGAAATAACATGTTCAATGATGTTCC
TTTTCACAACCGGGTTGATCTTCGCACAAAAATACCCCGATCCACCCCGGACCACAACAA
CAACTGGTTTAACATCCCTTCGTCACATTTTCAGTCAGAAAACAAAATGTCATTTTGTGA
CAGTGCAAGTAAAAGATACGGCTTGAAATCTGACAAACGAGGCAAAATTGGAAGAAGTCC
TTCGTCGCATAAAACGCGTTCGAAAGTGGGAAACAGTAGGCAATCAAGCAATCAAAAGAT
GGTGAATCTGCACAATCACGCTATTCCCATGATGTCACTAACTTTTAAAAACAAAAGAAT
AAACAAGAAAAGCGACTCAGAAAAAGTAACCAGATCTTGTCAGAGAAGTACCGACTCGAG
CCCACCGGCCCTTGCATCAAACGCTTTCCACACATCAAATGATAAACATGAAGCAACTTT
TTTAAAACCGTCAGATGTATCAAGGAGACTAAGTTCAAGCGCACCACCTTCTCAAGTATA
TGCGGAAGCAGGCAACACAACTTTTTCATCAGCAAAGCAAGCAAAACATTTTGATTTTCA
CAACGGAGCAAAACACACATCAAGTGCACTGAGTCCCACACCATCTCAATCTGTGTTTGG
CGACCTGGTTCAGGGAGAATGCAATAATAGTGATGCAACACCTTGGCAGGAACTCAGTGC
GGCCTTGGATGAAATGGGGGCGTGGACTGTGGAAACAGTTTGTCAGTTTTTGGACGAAAT
TGGATGCGGACAATATGAACAAGTGTTTAAAGACAACAAAATTGATGGCGATGCCCTTCC
ACTGTTAGTTGAGCGCCATCTAGTTGATAAAATGGGTCTGAAACTCGGACATGCACTGAA
AGTCATTGCCCGAGTACACCGACGCCTAGGAACGCATCTTTCGCTTGTAACCAACCAACA
TTGTCCAATAACATGGCCGCATGGTTTTTACGGATCACATGAAATGTGCAAGCAATTTGA
GCAATCGAAATCTGAAACCAACGAAGATTGCACACCCTGACGGGAACTGCCCTGCGAAAT
CTTTTCCAACATTGTGCACTT
| ProSiteProfiles |
SAND_dom (IPR000770) - T[292-372] 18.155 |
| Gene3D |
SAND-like_dom_sf (IPR010919) - T[294-387] 1.8E-27 |
| PANTHER |
GMEB1/2 (IPR024830) - T[295-385] 5.4E-60 |
| SUPERFAMILY |
SAND-like_dom_sf (IPR010919) - T[298-383] 2.79E-27 |
| Pfam |
SAND_dom (IPR000770) - T[299-371] 5.0E-23 |
| SMART |
SAND_dom (IPR000770) - T[300-372] 1.6E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|