- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Clone 'AHC0AAA222YC06' >
- Clone 'AHC0AAA232YK04' >
- Transcript 'KH2012:KH.C3.148.v2....' >
- Transcript 'Phmamm.CG.MTP2014.S5...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S575.g10210.01.t
Possible name(s)
DEAF1; SAMD11; SAMD7
Gene model
Location
S575 [60,792 / 70,413]
Amino acid sequence
Length: 998
>Phmamm.CG.MTP2014.S575.g10210.01.p
KSNYCKTAKMRGDKRKTSKSSTDSRQGRNQNVEKTTVYHIDTTLSIDNDLKETTGNIGQN
RSCKQVGDKGFKSTDLRLNVAKHQNDAEPSEKNANGCNPTKPLVSNNMQVDEPDGATTNN
ETISHGDDKDELQKENEDCSVKSNSHQNVASNFYSSLNLLATRAFINVKLEPVEVSVAER
CGKDYMSSLENRTSTAGSNTSVSLYQRRSESQSPVSHDHDLQYLQSHAELSPQTFAEQLR
HNDSASMVVCRSLPGKTSNQGLDSTNTSGAGRTNGSSLHHFVTRYTIEKPDESSRLGLDI
CLENDSSNEAIMEVECGGNKGLLYVTKLCQGSKGQSILFNDEWLTPNEFQFISGRETAKD
WKRSIRHCGKSLKTLMTKGVLQVHPPVCECDYCKGQASGKTENTKPGVGLQNDTSLCADD
MNDQPLSLVRNDASATQSLKQGREGGLNSIISQLHNKRANIGVDAVSPGAMESLDLRVSS
STNGSGNRKRRNDSSHNDYASDVDEDHSVSSSKKYLSDADENYRNQSYDQNSGNTQRQRT
QPNPRWENERSADPQNTFNQWLNTENGFRPFHRPGFGYSEYALYDAMKRAVASVAAQPNG
YCTQPPPMTTRHTGGGKKQPMMELTSPRNKNLDRKMSDVYSDWDYPKPIPQNMEPLNGNN
MFNDVPFHNRVDLRTKIPRSTPDHNNNWFNIPSSHFQSENKMSFCDSASKRYGLKSDKRG
KIGRSPSSHKTRSKVGNSRQSSNQKMVNLHNHAIPMMSLTFKNKRINKKSDSEKVTRSCQ
RSTDSSPPALASNAFHTSNDKHEATFLKPSDVSRRLSSSAPPSQVYAEAGNTTFSSAKQA
KHFDFHNGAKHTSSALSPTPSQSVFGDLVQGECNNSDATPWQELSAALDEMGAWTVETVC
QFLDEIGCGQYEQVFKDNKIDGDALPLLVERHLVDKMGLKLGHALKVIARVHRRLGTHLS
LVTNQHCPITWPHGFYGSHEMCKQFEQSKSETNEDCTP
Nucleotide sequence
Length: 3,126
>Phmamm.CG.MTP2014.S575.g10210.01.t
GCAAGTCAAACTACTGTAAAACTGCTAAAATGCGAGGTGACAAACGAAAAACATCCAAAA
GCAGTACTGATTCGCGGCAAGGAAGAAATCAAAACGTCGAAAAGACAACAGTGTACCACA
TTGATACAACCCTGAGCATAGATAATGACTTGAAAGAAACAACCGGGAACATAGGACAAA
ACCGAAGTTGCAAACAAGTTGGAGACAAAGGATTTAAATCGACTGATCTGAGATTGAACG
TTGCTAAGCATCAAAACGACGCAGAACCTTCCGAAAAAAATGCCAACGGTTGCAATCCTA
CAAAGCCGTTGGTGTCAAACAACATGCAAGTGGATGAACCTGACGGGGCTACAACGAACA
ACGAAACTATCAGTCACGGCGATGACAAGGATGAACTACAGAAAGAAAACGAAGATTGTT
CGGTCAAGTCCAATTCGCACCAAAATGTCGCTTCAAATTTTTACTCAAGCTTAAATTTGC
TGGCTACTCGTGCTTTTATCAACGTAAAACTGGAACCGGTTGAAGTATCGGTGGCAGAAA
GATGTGGAAAAGATTACATGTCTAGTTTAGAAAACAGGACAAGCACTGCAGGGAGTAATA
CCAGTGTAAGCCTTTACCAACGCAGAAGTGAAAGTCAAAGTCCCGTTTCCCACGACCATG
ACCTGCAATATTTGCAATCTCACGCGGAACTTTCCCCACAAACATTTGCCGAGCAGTTGC
GGCACAACGATTCGGCAAGCATGGTTGTTTGTCGATCACTACCCGGAAAAACATCTAACC
AGGGTTTAGACTCTACAAATACAAGTGGTGCAGGCCGAACCAATGGATCCTCGCTACATC
ATTTTGTTACTCGATACACCATCGAAAAACCCGACGAATCATCGAGGTTGGGACTTGACA
TATGCCTGGAAAATGATAGCTCCAACGAGGCAATAATGGAAGTGGAGTGTGGGGGAAACA
AAGGTCTACTGTACGTAACCAAACTTTGCCAAGGAAGCAAAGGTCAGTCAATTCTTTTTA
ACGATGAATGGTTGACCCCGAATGAATTTCAATTTATAAGCGGAAGAGAAACTGCCAAAG
ACTGGAAGCGGAGTATTCGTCACTGCGGAAAAAGCTTGAAAACTTTAATGACAAAGGGTG
TTCTGCAAGTTCATCCACCTGTGTGCGAATGTGATTATTGCAAAGGACAAGCGTCGGGTA
AAACCGAAAATACCAAACCGGGTGTAGGTTTGCAAAACGACACTTCCTTGTGCGCTGACG
ACATGAACGATCAACCTTTGTCTCTTGTACGGAATGATGCTTCAGCAACACAATCTTTAA
AACAAGGACGCGAGGGTGGTCTAAATTCTATCATATCCCAATTGCATAACAAAAGGGCAA
ACATTGGAGTTGATGCAGTATCCCCAGGTGCTATGGAATCCTTGGATTTGAGGGTGAGTT
CTTCCACCAACGGTTCAGGGAACAGAAAAAGACGAAATGATTCCTCTCATAATGACTATG
CTAGTGACGTTGATGAAGATCATTCCGTTTCCTCGTCGAAAAAATATCTCTCTGATGCAG
ATGAAAATTACCGAAATCAGAGTTACGATCAAAACAGTGGAAACACCCAAAGACAACGTA
CGCAGCCTAATCCACGTTGGGAGAACGAAAGATCAGCGGACCCGCAAAACACTTTTAACC
AGTGGTTAAACACCGAAAATGGCTTCAGGCCGTTTCATCGTCCAGGTTTTGGATATAGCG
AGTATGCTTTATACGATGCAATGAAAAGGGCAGTCGCTTCGGTTGCAGCTCAACCAAATG
GTTACTGCACACAGCCTCCACCTATGACCACGCGCCACACCGGAGGAGGCAAGAAGCAGC
CCATGATGGAATTGACTTCGCCACGCAACAAAAACCTGGACAGAAAGATGTCAGACGTAT
ACTCTGACTGGGATTATCCAAAACCAATACCTCAAAACATGGAGCCTTTAAACGGAAATA
ACATGTTCAATGATGTTCCTTTTCACAACCGGGTTGATCTTCGCACAAAAATACCCCGAT
CCACCCCGGACCACAACAACAACTGGTTTAACATCCCTTCGTCACATTTTCAGTCAGAAA
ACAAAATGTCATTTTGTGACAGTGCAAGTAAAAGATACGGCTTGAAATCTGACAAACGAG
GCAAAATTGGAAGAAGTCCTTCGTCGCATAAAACGCGTTCGAAAGTGGGAAACAGTAGGC
AATCAAGCAATCAAAAGATGGTGAATCTGCACAATCACGCTATTCCCATGATGTCACTAA
CTTTTAAAAACAAAAGAATAAACAAGAAAAGCGACTCAGAAAAAGTAACCAGATCTTGTC
AGAGAAGTACCGACTCGAGCCCACCGGCCCTTGCATCAAACGCTTTCCACACATCAAATG
ATAAACATGAAGCAACTTTTTTAAAACCGTCAGATGTATCAAGGAGACTAAGTTCAAGCG
CACCACCTTCTCAAGTATATGCGGAAGCAGGCAACACAACTTTTTCATCAGCAAAGCAAG
CAAAACATTTTGATTTTCACAACGGAGCAAAACACACATCAAGTGCACTGAGTCCCACAC
CATCTCAATCTGTGTTTGGCGACCTGGTTCAGGGAGAATGCAATAATAGTGATGCAACAC
CTTGGCAGGAACTCAGTGCGGCCTTGGATGAAATGGGGGCGTGGACTGTGGAAACAGTTT
GTCAGTTTTTGGACGAAATTGGATGCGGACAATATGAACAAGTGTTTAAAGACAACAAAA
TTGATGGCGATGCCCTTCCACTGTTAGTTGAGCGCCATCTAGTTGATAAAATGGGTCTGA
AACTCGGACATGCACTGAAAGTCATTGCCCGAGTACACCGACGCCTAGGAACGCATCTTT
CGCTTGTAACCAACCAACATTGTCCAATAACATGGCCGCATGGTTTTTACGGATCACATG
AAATGTGCAAGCAATTTGAGCAATCGAAATCTGAAACCAACGAAGATTGCACACCCTGAC
GGGAACTGCCCTGCGAAATCTTTTCCAACATTGTGCACTTACTACTGTGAAAATTTGCTT
TTGTATTTGTTCCTTTTTTATTTTTACAACATATTCATTTGCGTTATAGTAGTAACGAAA
CTGATC
| ProSiteProfiles |
SAND_dom (IPR000770) - T[302-382] 18.155 |
| Gene3D |
SAND-like_dom_sf (IPR010919) - T[304-397] 4.1E-27 |
| PANTHER |
GMEB1/2 (IPR024830) - T[305-395] 1.1E-59 |
| SUPERFAMILY |
SAND-like_dom_sf (IPR010919) - T[308-393] 6.28E-27 |
| Pfam |
SAND_dom (IPR000770) - T[309-381] 1.1E-22 |
| SMART |
SAND_dom (IPR000770) - T[310-382] 1.6E-23 |
| SUPERFAMILY |
SAM/pointed_sf (IPR013761) - T[890-953] 4.87E-15 |
| SMART |
SAM (IPR001660) - T[891-957] 7.4E-14 |
| Pfam |
SAM (IPR001660) - T[893-953] 4.0E-15 |
| ProSiteProfiles |
SAM (IPR001660) - T[894-939] 11.67 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SAM11_HUMAN | 52 % | 85.9 | 5.04E-17 |