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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...' > 
  2. Transcript 'Moocci.CG.ELv1_2.S63...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S566.g10130.01.t

Possible name(s)

PARD6G; SQSTM1

Gene model

Phmamm.CG.MTP2014.S566.g10130

Location

S566 [86,747 / 88,282]

Sequences

Amino acid sequence

Length: 258

>Phmamm.CG.MTP2014.S566.g10130.01.p
MSLQFKAFLYEDKPGRPKEIRRFAVDQDVSSSYDYLRRKVATVFPNLGEDNFALQWRDTD
GDLIWFNSDEELIQALGQLNTDVFRLYIKEKKPEEKSQESTGCGSSSQQQSQGQFAADSY
LKHMGNAVADFLQPFGIDVDINVEHKGKQEKCPGSQKPETSDQGQKQDTAQDKSRDSPDE
TDWTFLKKDGAKSEDETKESTGEDKMETDEDGGLKAALSQLMDMGFNDHGGWLTNLLKTY
NCDISRVLEAMQPAQGSK

Nucleotide sequence

Length: 777

>Phmamm.CG.MTP2014.S566.g10130.01.t
ATGTCACTTCAATTCAAAGCATTCTTGTATGAGGACAAACCTGGCCGACCAAAGGAAATT
CGAAGGTTTGCTGTGGACCAGGACGTTTCCAGTAGCTATGATTATTTAAGAAGAAAGGTT
GCCACTGTATTTCCAAACCTTGGTGAGGACAACTTTGCATTGCAATGGCGTGACACTGAT
GGTGATCTCATTTGGTTCAACTCAGATGAGGAATTGATTCAAGCACTTGGGCAACTAAAC
ACTGATGTATTCCGTTTGTACATAAAGGAAAAAAAGCCGGAAGAAAAGTCACAAGAGTCC
ACAGGATGTGGTTCATCAAGCCAACAGCAATCTCAAGGACAGTTTGCAGCTGACAGCTAT
CTCAAGCACATGGGGAATGCTGTAGCCGATTTTCTTCAGCCATTTGGCATTGATGTGGAC
ATAAACGTTGAACATAAGGGCAAACAGGAAAAATGTCCGGGAAGTCAAAAACCTGAAACA
AGTGATCAAGGTCAAAAACAAGACACAGCACAAGACAAGTCAAGAGACAGCCCTGATGAA
ACCGACTGGACATTTTTAAAAAAAGATGGAGCCAAATCAGAAGACGAAACCAAAGAAAGT
ACCGGGGAAGACAAAATGGAAACAGATGAAGATGGGGGATTGAAAGCTGCCTTATCACAG
TTGATGGACATGGGCTTCAATGATCATGGGGGATGGCTTACAAATCTTCTGAAAACTTAC
AACTGTGACATATCTCGAGTCCTGGAAGCCATGCAACCTGCCCAAGGGTCCAAGTAG

InterProScan

ProSiteProfiles
PB1_dom (IPR000270) - T[2-91] 18.971
SMART
PB1_dom (IPR000270) - T[2-91] 1.6E-8
Pfam
PB1_dom (IPR000270) - T[19-90] 6.9E-10
Pfam
SQSTM_UBA (IPR033741) - T[209-252] 8.2E-11
SUPERFAMILY
UBA-like_sf (IPR009060) - T[209-254] 6.8E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value